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Putative Neisseria gonorrhoeae 980042-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,223,307 bp
GenBank #: PTPM00000000 (NZ_PTPM00000000)
REBASE acronym: Ngo4218
Org_num: 30962
All begin C5B36_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
8830 | replication-associated recombination protein A | |||
8835 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo4218ORF8860P |
8840 | hydroxyacid dehydrogenase | |||
8845 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo4218ORF8860P |
8850 | 186 aa hypothetical protein | |||
8855 | 0 aa hypothetical protein | |||
8860 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.Ngo4218ORF8860P |
8865 | ABC transporter | |||
880 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
885 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo4218ORF885P | |
890 | DNA damage-inducible protein D | |||
895 | S | S.NgoWNII (100% identity) | S.Ngo4218ORF885P | |
900 | sodium:proton exchanger | |||
905 | R | Ngos1291ORF7750P (100% identity) | Ngo4218ORF885P | |
910 | ATP-dependent Clp protease ATP-binding subunit | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
12495 | replication initiation factor | |||
12500 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo4218ORF12510P | |
??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo4218ORF12510P | |
??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo4218ORF12510P | |
12520 | 48 aa hypothetical protein | |||
5 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo4218ORF5P |
10 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo4218ORF5P |
??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo4218ORF5P | |
20 | uroporphyrinogen decarboxylase | |||
8715 | 3-isopropylmalate dehydrogenase | |||
8720 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo4218ORF8725P |
8725 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo4218ORF8725P |
8730 | 3-isopropylmalate dehydratase small subunit | |||
2740 | 5-(carboxyamino)imidazole ribonucleotide | |||
2745 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo4218ORF2750P |
2750 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo4218ORF2750P |
2755 | anthranilate synthase component I | |||
11810 | excinuclease ABC subunit UvrA | |||
11815 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo4218ORF11820P |
11820 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo4218ORF11820P |
11825 | transposase | |||
8320 | leucine--tRNA ligase | |||
8325 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo4218ORF8335P |
8330 | DNA adenine methylase | |||
??? | M | M.NgoCT213ORF40P (85% identity) | M.Ngo4218ORF8335P | |
8345 | 0 aa hypothetical protein | |||
45 | 0 aa hypothetical protein | |||
50 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo4218ORF55P |
55 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo4218ORF55P |
60 | IS1595 family transposase | |||
4355 | GTPase ObgE | |||
4360 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo4218ORF4360P |
4365 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo4218ORF4360P |
4370 | cysteine--tRNA ligase | |||
3225 | ribosome-recycling factor | |||
3230 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo4218ORF3230P |
3235 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo4218ORF3230P |
3240 | group 2 glycosyl transferase | |||
7815 | 93 aa hypothetical protein | |||
??? | R | Ngo4318ORF6975P (100% identity) | GGTGA | Ngo4218ORF7825P |
7825 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo4218ORF7825P |
7830 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo4218ORF7825P |
7835 | RNA-binding transcriptional accessory protein | |||
350 | phenylalanine--tRNA ligase subunit beta | |||
355 | R | NgoWSORF391P (100% identity) | Ngo4218ORFAP | |
??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo4218ORFAP | |
370 | V | V.NgoWSORF391P (100% identity) | V.Ngo4218ORFAP | |
375 | phenylalanine--tRNA ligase subunit alpha | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3860 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo4218ORF3860P |
3865 | R | NgoWPIIP (100% identity) | CCACC | Ngo4218ORF3860P |
3870 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
6985 | tRNA pseudouridine(55) synthase TruB | |||
??? | M | M.Ngo4318ORF5715P (100% identity) | M.Ngo4218ORF6990P | |
7000 | R | Ngos1291ORF8930P (100% identity) | Ngo4218ORF6990P | |
7005 | alpha-hydroxy-acid oxidizing protein |