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Putative Neisseria gonorrhoeae 980041-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,226,960 bp
GenBank #: PTPN00000000 (NZ_PTPN00000000)
REBASE acronym: Ngo4118
Org_num: 30949
All begin C5B29_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4350 | replication-associated recombination protein A | |||
4355 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo4118ORF4380P |
4360 | hydroxyacid dehydrogenase | |||
4365 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo4118ORF4380P |
4370 | 186 aa hypothetical protein | |||
4375 | 0 aa hypothetical protein | |||
4380 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.Ngo4118ORF4380P |
4385 | ABC transporter | |||
345 | ATP-dependent Clp protease ATP-binding subunit | |||
350 | R | Ngos1291ORF7750P (100% identity) | Ngo4118ORF370P | |
355 | sodium:proton exchanger | |||
360 | S | S.NgoWNII (100% identity) | S.Ngo4118ORF370P | |
365 | DNA damage-inducible protein D | |||
370 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo4118ORF370P | |
375 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
12620 | replication initiation factor | |||
12625 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo4118ORF12635P | |
??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo4118ORF12635P | |
??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo4118ORF12635P | |
12645 | 48 aa hypothetical protein | |||
4235 | 3-isopropylmalate dehydrogenase | |||
4240 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo4118ORF4245P |
4245 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo4118ORF4245P |
4250 | 3-isopropylmalate dehydratase small subunit | |||
1285 | 5-(carboxyamino)imidazole ribonucleotide | |||
1290 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo4118ORF1295P |
1295 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo4118ORF1295P |
1300 | anthranilate synthase component I | |||
12040 | excinuclease ABC subunit UvrA | |||
12045 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo4118ORF12050P |
12050 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo4118ORF12050P |
12055 | transposase | |||
5060 | GTPase ObgE | |||
5065 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo4118ORF5065P |
5070 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo4118ORF5065P |
5075 | cysteine--tRNA ligase | |||
6125 | leucine--tRNA ligase | |||
6130 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo4118ORF6130P |
6135 | DNA adenine methylase | |||
8995 | 93 aa hypothetical protein | |||
??? | R | Ngo4318ORF6975P (100% identity) | GGTGA | Ngo4118ORF9005P |
9005 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo4118ORF9005P |
9010 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo4118ORF9005P |
9015 | RNA-binding transcriptional accessory protein | |||
6135 | DNA adenine methylase | |||
??? | M | M.NgoCT213ORF40P (85% identity) | M.Ngo4118ORF6140P | |
6150 | 0 aa hypothetical protein | |||
2565 | ribosome-recycling factor | |||
2570 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo4118ORF2570P |
2575 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo4118ORF2570P |
2580 | group 2 glycosyl transferase | |||
600 | 0 aa hypothetical protein | |||
605 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo4118ORF605P |
610 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo4118ORF605P |
??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo4118ORF605P | |
620 | uroporphyrinogen decarboxylase | |||
645 | 0 aa hypothetical protein | |||
650 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo4118ORF655P |
655 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo4118ORF655P |
660 | IS1595 family transposase | |||
950 | phenylalanine--tRNA ligase subunit beta | |||
955 | R | NgoWSORF391P (100% identity) | Ngo4118ORF965P | |
??? | M | M.NgoWSORF391P (100% identity) | M.Ngo4118ORF965P | |
970 | V | V.NgoWSORF391P (100% identity) | V.Ngo4118ORF965P | |
975 | phenylalanine--tRNA ligase subunit alpha | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
8505 | tRNA pseudouridine(55) synthase TruB | |||
??? | M | M.Ngo4318ORF5715P (100% identity) | M.Ngo4118ORF8510P | |
8520 | R | Ngos1291ORF8930P (100% identity) | Ngo4118ORF8510P | |
8525 | alpha-hydroxy-acid oxidizing protein | |||
5640 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
5645 | R | NgoWPIIP (100% identity) | CCACC | Ngo4118ORF5650P |
5650 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo4118ORF5650P |