Ref: Hirk,S. et al. unpublished

REBASE ref # 26993

Contig set: 2,226,960 bp

GenBank #: PTPN00000000 (NZ_PTPN00000000)

REBASE acronym: Ngo4118

Org_num: 30949

 

All begin C5B29_

Type I
ORF Gene Most similar Specificity Name
 
4350 replication-associated recombination protein A
4355 R NgoWOIP (100% identity) GAGNNNNNTAC Ngo4118ORF4380P
4360 hydroxyacid dehydrogenase
4365 S S.Ngos1291I (100% identity) GAGNNNNNTAC S.Ngo4118ORF4380P
4370 186 aa hypothetical protein
4375 0 aa hypothetical protein
4380 M M.Ngos1291I (100% identity) GAGNNNNNTAC M.Ngo4118ORF4380P
4385 ABC transporter
 
345 ATP-dependent Clp protease ATP-binding subunit
350 R Ngos1291ORF7750P (100% identity) Ngo4118ORF370P
355 sodium:proton exchanger
360 S S.NgoWNII (100% identity) S.Ngo4118ORF370P
365 DNA damage-inducible protein D
370 M M.Ngo4718ORF1640P (100% identity) M.Ngo4118ORF370P
375 ADP-L-glycero-D-mannoheptose-6-epimerase
Type II
ORF Gene Most similar Specificity Name
 
12620 replication initiation factor
12625 V V.Ngos1291ORF65P (100% identity) V.Ngo4118ORF12635P
??? R NgoTFGB2ORF1219P (100% identity) Ngo4118ORF12635P
??? M M.Ngos1291ORF65P (100% identity) M.Ngo4118ORF12635P
12645 48 aa hypothetical protein
 
4235 3-isopropylmalate dehydrogenase
4240 R Ngos1291ORF9120P (100% identity) GGNNCC Ngo4118ORF4245P
4245 M M.NmeMBW2ORFJP (100% identity) GGNNCC M.Ngo4118ORF4245P
4250 3-isopropylmalate dehydratase small subunit
 
1285 5-(carboxyamino)imidazole ribonucleotide
1290 R Ngos1291ORF10080P (100% identity) GCCGGC Ngo4118ORF1295P
1295 M M.Ngos1291ORF10080P (100% identity) GCCGGC M.Ngo4118ORF1295P
1300 anthranilate synthase component I
 
12040 excinuclease ABC subunit UvrA
12045 R Ngos1291ORF260P (100% identity) CCGCGG Ngo4118ORF12050P
12050 M M.Ngos1291ORF260P (100% identity) CCGCGG M.Ngo4118ORF12050P
12055 transposase
 
5060 GTPase ObgE
5065 M M.Ngos1291ORF4640P (100% identity) RGCGCY M.Ngo4118ORF5065P
5070 R Ngos1291ORF4640P (100% identity) RGCGCY Ngo4118ORF5065P
5075 cysteine--tRNA ligase
 
6125 leucine--tRNA ligase
6130 R Ngos1291ORF5750P (100% identity) GATC Ngo4118ORF6130P
6135 DNA adenine methylase
 
8995 93 aa hypothetical protein
??? R Ngo4318ORF6975P (100% identity) GGTGA Ngo4118ORF9005P
9005 M M1.NgoFQ35ORF11380P (100% identity) GGTGA M1.Ngo4118ORF9005P
9010 M M1.NgoWSIII (100% identity) GGTGA M2.Ngo4118ORF9005P
9015 RNA-binding transcriptional accessory protein
 
6135 DNA adenine methylase
??? M M.NgoCT213ORF40P (85% identity) M.Ngo4118ORF6140P
6150 0 aa hypothetical protein
 
2565 ribosome-recycling factor
2570 M M.NgoSH240ORFKP (100% identity) GGCC M.Ngo4118ORF2570P
2575 R Ngos1291ORF3515P (100% identity) GGCC Ngo4118ORF2570P
2580 group 2 glycosyl transferase
 
600 0 aa hypothetical protein
605 M M.Ngos1291ORF7560P (100% identity) GCSGC M.Ngo4118ORF605P
610 R Ngos1291ORF7560P (100% identity) GCSGC Ngo4118ORF605P
??? H H.Ngo4718ORF645P (100% identity) H.Ngo4118ORF605P
620 uroporphyrinogen decarboxylase
 
645 0 aa hypothetical protein
650 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.Ngo4118ORF655P
655 RM Ngos1291ORF7515P (100% identity) GACNNNNNTGA Ngo4118ORF655P
660 IS1595 family transposase
 
950 phenylalanine--tRNA ligase subunit beta
955 R NgoWSORF391P (100% identity) Ngo4118ORF965P
??? M M.NgoWSORF391P (100% identity) M.Ngo4118ORF965P
970 V V.NgoWSORF391P (100% identity) V.Ngo4118ORF965P
975 phenylalanine--tRNA ligase subunit alpha
Type III
ORF Gene Most similar Specificity Name
 
8505 tRNA pseudouridine(55) synthase TruB
??? M M.Ngo4318ORF5715P (100% identity) M.Ngo4118ORF8510P
8520 R Ngos1291ORF8930P (100% identity) Ngo4118ORF8510P
8525 alpha-hydroxy-acid oxidizing protein
 
5640 tRNA 2-thiocytidine(32) synthetase TtcA
5645 R NgoWPIIP (100% identity) CCACC Ngo4118ORF5650P
5650 M M.Ngos1291ORF8455P (100% identity) CCACC M.Ngo4118ORF5650P
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