Neisseria gonorrhoeae 980039-18 |
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Putative Neisseria gonorrhoeae 980039-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,227,784 bp
GenBank #: PTPP00000000 (NZ_PTPP00000000)
REBASE acronym: Ngo3918
Org_num: 30953
All begin C5B32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12600 | 0 aa hypothetical protein | |||
| 12605 | M | M.Ngos1291I (100% identity) | M.Ngo3918ORF12605P | |
| 12610 | ABC transporter | |||
| 5005 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5010 | R | Ngos1291ORF7750P (100% identity) | Ngo3918ORF5030P | |
| 5015 | sodium:proton exchanger | |||
| 5020 | S | S.NgoWNII (100% identity) | S.Ngo3918ORF5030P | |
| 5025 | DNA damage-inducible protein D | |||
| 5030 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo3918ORF5030P | |
| 5035 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 8785 | replication-associated recombination protein A | |||
| 8790 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo3918ORF8790P |
| 8795 | hydroxyacid dehydrogenase | |||
| 8800 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo3918ORF8790P |
| 8805 | 186 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12470 | replication initiation factor | |||
| 12475 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo3918ORF12485P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo3918ORF12485P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo3918ORF12485P | |
| 12495 | 48 aa hypothetical protein | |||
| 11900 | transposase | |||
| 11905 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo3918ORF11905P |
| 11910 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo3918ORF11905P |
| 11915 | excinuclease ABC subunit UvrA | |||
| 8670 | 3-isopropylmalate dehydrogenase | |||
| 8675 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo3918ORF8680P |
| 8680 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo3918ORF8680P |
| 8685 | 3-isopropylmalate dehydratase small subunit | |||
| 4565 | GTPase ObgE | |||
| 4570 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo3918ORF4570P |
| 4575 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo3918ORF4570P |
| 4580 | cysteine--tRNA ligase | |||
| 6925 | 93 aa hypothetical protein | |||
| 6930 | R | Ngo4718ORF4860P (100% identity) | GGTGA | Ngo3918ORF6935P |
| 6935 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo3918ORF6935P |
| 6940 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo3918ORF6935P |
| 6945 | RNA-binding transcriptional accessory protein | |||
| 1140 | phenylalanine--tRNA ligase subunit alpha | |||
| 1145 | V | V.NgoWSORF391P (100% identity) | V.Ngo3918ORF1150P | |
| ??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo3918ORF1150P | |
| 1160 | R | NgoWSORF391P (100% identity) | Ngo3918ORF1150P | |
| 1165 | phenylalanine--tRNA ligase subunit beta | |||
| 1940 | ribosome-recycling factor | |||
| 1945 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo3918ORF1945P |
| 1950 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo3918ORF1945P |
| 1955 | group 2 glycosyl transferase | |||
| 4055 | anthranilate synthase component I | |||
| 4060 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo3918ORF4060P |
| 4065 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo3918ORF4060P |
| 4070 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 1455 | IS1595 family transposase | |||
| 1460 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo3918ORF1460P |
| 1465 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo3918ORF1460P |
| 1470 | 0 aa hypothetical protein | |||
| 1495 | uroporphyrinogen decarboxylase | |||
| ??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo3918ORF1510P | |
| 1505 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo3918ORF1510P |
| 1510 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo3918ORF1510P |
| 1515 | 60 aa hypothetical protein | |||
| 670 | leucine--tRNA ligase | |||
| 675 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo3918ORF675P |
| 680 | DNA adenine methylase | |||
| 680 | DNA adenine methylase | |||
| ??? | M | M.NgoCT213ORF40P (85% identity) | M.Ngo3918ORF685P | |
| 695 | 0 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10870 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 10875 | R | NgoWPIIP (100% identity) | CCACC | Ngo3918ORF10880P |
| 10880 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo3918ORF10880P |
| 2340 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo4518ORF6780P (100% identity) | M.Ngo3918ORF2345P | |
| 2355 | R | Ngos1291ORF8930P (100% identity) | Ngo3918ORF2345P | |
| 2360 | alpha-hydroxy-acid oxidizing protein | |||