Ref: Hirk,S. et al. unpublished

REBASE ref # 26993

Contig set: 2,214,439 bp

GenBank #: PTPR00000000 (NZ_PTPR00000000)

REBASE acronym: Ngo3718

Org_num: 30955

 

All begin C5B25_

Type I
ORF Gene Most similar Specificity Name
 
12285 0 aa hypothetical protein
12290 M M.Ngos1291ORF9245P (100% identity) M.Ngo3718ORF12290P
12295 ABC transporter
 
7040 replication-associated recombination protein A
7045 R NgoWOIP (100% identity) GAGNNNNNTAC Ngo3718ORF7045P
7050 hydroxyacid dehydrogenase
7055 S S.Ngos1291ORF9245P (100% identity) GAGNNNNNTAC S.Ngo3718ORF7045P
7060 186 aa hypothetical protein
 
345 ATP-dependent Clp protease ATP-binding subunit
350 R Ngos1291ORF7750P (100% identity) Ngo3718ORF370P
355 sodium:proton exchanger
360 S S.NgoWNII (100% identity) S.Ngo3718ORF370P
365 DNA damage-inducible protein D
370 M M.Ngo4718ORF1640P (100% identity) M.Ngo3718ORF370P
375 ADP-L-glycero-D-mannoheptose-6-epimerase
Type II
ORF Gene Most similar Specificity Name
 
11170 transposase
11175 M DNA (cytosine-5-)-methyltransferase CCGCGG M.Ngo3718ORF11175P
11180 R restriction endonuclease CCGCGG Ngo3718ORF11175P
11185 excinuclease ABC subunit UvrA
 
3235 M DNA (cytosine-5-)-methyltransferase GCSGC M.Ngo3718ORF3235P
3240 R restriction endonuclease GCSGC Ngo3718ORF3235P
??? H DEAD/DEAH box helicase H.Ngo3718ORF3235P
3250 uroporphyrinogen decarboxylase
 
6925 3-isopropylmalate dehydrogenase
6930 R Ngos1291ORF9120P (100% identity) GGNNCC Ngo3718ORF6935P
6935 M DNA (cytosine-5-)-methyltransferase GGNNCC M.Ngo3718ORF6935P
6940 3-isopropylmalate dehydratase small subunit
 
9950 5-(carboxyamino)imidazole ribonucleotide
9955 R NgoWSORF1056P (100% identity) GCCGGC Ngo3718ORF9960P
9960 M DNA cytosine methyltransferase GCCGGC M.Ngo3718ORF9960P
9965 anthranilate synthase component I
 
6065 GTPase ObgE
6070 M DNA cytosine methyltransferase RGCGCY M.Ngo3718ORF6070P
6075 R HaeII family restriction endonuclease RGCGCY Ngo3718ORF6070P
6080 cysteine--tRNA ligase
 
2650 phenylalanine--tRNA ligase subunit beta
2655 R endonuclease Ngo3718ORF2665P
??? M M.NgoWSORF391P (100% identity) M.Ngo3718ORF2665P
2670 V very short patch repair endonuclease V.Ngo3718ORF2665P
2675 phenylalanine--tRNA ligase subunit alpha
 
4925 RNA-binding transcriptional accessory protein
4930 M DNA (cytosine-5-)-methyltransferase GGTGA M1.Ngo3718ORF4930P
4935 M M1.NgoFQ35ORF11380P (100% identity) GGTGA M2.Ngo3718ORF4930P
4940 R Ngo4718ORF4860P (100% identity) GGTGA Ngo3718ORF4930P
4945 93 aa hypothetical protein
 
3275 0 aa hypothetical protein
3280 S methyltransferase GACNNNNNTGA S.Ngo3718ORF3285P
3285 RM SAM-dependent DNA methyltransferase GACNNNNNTGA Ngo3718ORF3285P
3290 IS1595 family transposase
 
9140 48 aa hypothetical protein
??? M M.Ngos1291ORF65P (100% identity) M.Ngo3718ORF9145P
??? R NgoWSORF1801P (100% identity) Ngo3718ORF9145P
9160 V very short patch repair endonuclease V.Ngo3718ORF9145P
9165 59 aa hypothetical protein
 
7695 ribosome-recycling factor
7700 M M.NgoPII (100% identity) GGCC M.Ngo3718ORF7700P
7705 R Ngos1291ORF3515P (100% identity) GGCC Ngo3718ORF7700P
7710 group 2 glycosyl transferase
 
5750 0 aa hypothetical protein
??? M M.NgoCT213ORF40P (100% identity) M.Ngo3718ORF5755P
5765 restriction endonuclease
 
??? hypothetical protein
5765 R restriction endonuclease GATC Ngo3718ORF5765P
5770 leucine--tRNA ligase
Type III
ORF Gene Most similar Specificity Name
 
??? M hypothetical protein M.Ngo3718ORF12925P
 
??? M type III restriction endonuclease HindVIP subunit M M.Ngo3718ORF10910P
10915 R Ngos1291ORF8930P (100% identity) Ngo3718ORF10910P
10920 alpha-hydroxy-acid oxidizing protein
 
2150 tRNA 2-thiocytidine(32) synthetase TtcA
2155 R NgoWPIIP (100% identity) Ngo3718ORF2160P
2160 M type III restriction endonuclease subunit M M.Ngo3718ORF2160P