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Putative Ralstonia solanacearum SL3882 RM systems
Ref: Cho,H. et al. unpublished
REBASE ref # 27464
Sequence length: | GenBank #: | |
Chromosome: | 3,942,912 bp | CP022778 |
plasmid unnamed: | 2,082,957 bp | CP022779 |
REBASE acronym: Rso3882
Org_num: 31049
All begin CJO87_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
200 | Rrf2 family transcriptional regulator | |||
205 | M | M.RsoYQORF285P (100% identity) | M.Rso3882ORF205P | |
??? | R | RsoT78ORF205P (100% identity) | Rso3882ORF205P | |
220 | histidine kinase | |||
3250 | WYL domain-containing protein | |||
3255 | M | M.RsoT60ORF3260P (100% identity) | M.Rso3882ORF3255P | |
3260 | S | S.RsoT60ORF3260P (100% identity) | S.Rso3882ORF3255P | |
3265 | R | RsoT60ORF3260P (100% identity) | Rso3882ORF3255P | |
3270 | 362 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
15 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
??? | M | M.RsoT60ORF25P (100% identity) | M.Rso3882ORF20P | |
25 | DUF87 domain-containing protein | |||
1070 | 98 aa hypothetical protein | |||
??? | M | M1.RsoT60ORF1085P (100% identity) | M1.Rso3882ORF1080P | |
??? | M | M.RsoT95ORF1060P (100% identity) | M2.Rso3882ORF1080P | |
1090 | 278 aa hypothetical protein | |||
1190 | YOPP/AvrRxv family protein | |||
1195 | M | M.Rsp650ORF25870P (100% identity) | M.Rso3882ORF1195P | |
1200 | 1367 aa hypothetical protein | |||
1435 | 71 aa hypothetical protein | |||
??? | M | M1.RsoT60ORF1450P (100% identity) | M1.Rso3882ORF1445P | |
??? | M | M2.RsoT60ORF1450P (100% identity) | M2.Rso3882ORF1445P | |
1455 | type III secretion system effector protein | |||
1565 | IS5/IS1182 family transposase | |||
1570 | M | M.Rsp650ORF25870P (100% identity) | M.Rso3882ORF1570P | |
1575 | 1367 aa hypothetical protein | |||
7905 | tryptophan synthase subunit beta | |||
7910 | M | M.Rsp647ORF10140P (100% identity) | GTWWAC | M.Rso3882ORF7910P |
7915 | tryptophan synthase subunit alpha | |||
11750 | Com family DNA-binding transcriptional | |||
11755 | M | M.RsoT60ORF11755P (100% identity) | M.Rso3882ORF11755P | |
11760 | 68 aa hypothetical protein | |||
13240 | M | M.Rsp650ORF13560P (100% identity) | M.Rso3882ORF13240P | |
13245 | DNA-binding protein | |||
13360 | DUF86 domain-containing protein | |||
13365 | M | M2.Rsp647ORF4655P (100% identity) | M1.Rso3882ORF13365P | |
13370 | M | M2.Rsp650ORF13700P (100% identity) | M2.Rso3882ORF13365P | |
13375 | 135 aa hypothetical protein | |||
13895 | 1367 aa hypothetical protein | |||
13900 | M | M.RsoYQORF1280P (100% identity) | M.Rso3882ORF13900P | |
13905 | YOPP/AvrRxv family protein | |||
plasmid unnamed | ||||
20930 | 118 aa hypothetical protein | |||
??? | M | M1.RsoT60ORF20945P (100% identity) | M1.Rso3882ORF20940P | |
20945 | M | M2.RsoT78ORF21055P (100% identity) | M2.Rso3882ORF20940P | |
20950 | 121 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
95 | bifunctional (p)ppGpp | |||
100 | R | RsoYQMrrP (100% identity) | Rso3882MrrP | |
105 | 0 aa hypothetical protein | |||
3105 | 405 aa hypothetical protein | |||
3110 | R | RsoT60McrBP (100% identity) | Rso3882McrBP | |
3115 | R | RsoT60McrCP (100% identity) | Rso3882McrCP | |
3120 | 161 aa hypothetical protein |