Ralstonia solanacearum T60 |
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Putative Ralstonia solanacearum T60 RM systems
Ref: Cho,H. et al. unpublished
REBASE ref # 27464
| Sequence length: | GenBank #: | |
| Chromosome: | 3,944,067 bp | CP022768 |
| plasmid unnamed: | 2,071,487 bp | CP022769 |
REBASE acronym: RsoT60
Org_num: 31042
All begin CJO81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 205 | Rrf2 family transcriptional regulator | |||
| 210 | M | M.RsoYQORF285P (100% identity) | M.RsoT60ORF210P | |
| ??? | R | RsoT78ORF205P (100% identity) | RsoT60ORF210P | |
| 225 | histidine kinase | |||
| 3255 | WYL domain-containing protein | |||
| 3260 | M | M.Rso3882ORF3255P (100% identity) | M.RsoT60ORF3260P | |
| 3265 | S | S.Rso3882ORF3255P (100% identity) | S.RsoT60ORF3260P | |
| 3270 | R | Rso3882ORF3255P (100% identity) | RsoT60ORF3260P | |
| 3275 | 362 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | IS5/IS1182 family transposase | |||
| ??? | M | M.RsoT42ORF20P (100% identity) | M.RsoT60ORF25P | |
| 30 | DUF87 domain-containing protein | |||
| 1075 | 98 aa hypothetical protein | |||
| ??? | M | M1.RsoT25ORF1115P (100% identity) | M1.RsoT60ORF1085P | |
| ??? | M | M.RsoT95ORF1060P (100% identity) | M2.RsoT60ORF1085P | |
| 1095 | 278 aa hypothetical protein | |||
| 1195 | YOPP/AvrRxv family protein | |||
| 1200 | M | M.Rsp650ORF25870P (100% identity) | M.RsoT60ORF1200P | |
| 1205 | 1367 aa hypothetical protein | |||
| 1440 | 71 aa hypothetical protein | |||
| ??? | M | M1.Rso3882ORF1445P (100% identity) | M1.RsoT60ORF1450P | |
| ??? | M | M2.Rso3882ORF1445P (100% identity) | M2.RsoT60ORF1450P | |
| 1460 | type III secretion system effector protein | |||
| 1570 | IS5/IS1182 family transposase | |||
| 1575 | M | M.Rsp650ORF25870P (100% identity) | M.RsoT60ORF1575P | |
| 1580 | 1367 aa hypothetical protein | |||
| 7905 | tryptophan synthase subunit beta | |||
| 7910 | M | M.Rsp647ORF10140P (100% identity) | GTWWAC | M.RsoT60ORF7910P |
| 7915 | tryptophan synthase subunit alpha | |||
| 11750 | Com family DNA-binding transcriptional | |||
| 11755 | M | M.RsoT02ORFFP (77% identity) | M.RsoT60ORF11755P | |
| 11760 | 68 aa hypothetical protein | |||
| 13240 | M | M.Rsp650ORF13560P (100% identity) | M.RsoT60ORF13240P | |
| 13245 | DNA-binding protein | |||
| 13360 | DUF86 domain-containing protein | |||
| 13365 | M | M2.Rsp647ORF4655P (100% identity) | M1.RsoT60ORF13365P | |
| 13370 | M | M2.Rsp650ORF13700P (100% identity) | M2.RsoT60ORF13365P | |
| 13375 | 135 aa hypothetical protein | |||
| 13895 | 1367 aa hypothetical protein | |||
| 13900 | M | M.RsoYQORF1280P (100% identity) | M.RsoT60ORF13900P | |
| 13905 | YOPP/AvrRxv family protein | |||
| plasmid unnamed | ||||
| 20935 | 118 aa hypothetical protein | |||
| ??? | M | M1.Rso3882ORF20940P (100% identity) | M1.RsoT60ORF20945P | |
| 20950 | M | M2.RsoT78ORF21055P (100% identity) | M2.RsoT60ORF20945P | |
| 20955 | 121 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 100 | bifunctional (p)ppGpp | |||
| 105 | R | RsoYQMrrP (100% identity) | RsoT60MrrP | |
| 110 | 0 aa hypothetical protein | |||
| 3110 | 405 aa hypothetical protein | |||
| 3115 | R | Rso3882McrBP (100% identity) | RsoT60McrBP | |
| 3120 | R | Rso3882McrCP (100% identity) | RsoT60McrCP | |
| 3125 | 161 aa hypothetical protein | |||