Ref: Cho,H. et al. unpublished

REBASE ref # 27464

Sequence length:GenBank #:
Chromosome: 3,944,067 bp CP022768
plasmid unnamed: 2,071,487 bp CP022769

REBASE acronym: RsoT60

Org_num: 31042

 

All begin CJO81_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
205 Rrf2 family transcriptional regulator
210 M M.RsoT78ORF205P (1% identity) M.RsoT60ORF210P
??? R RsoT78ORF205P (1% identity) RsoT60ORF210P
225 histidine kinase
 
3255 WYL domain-containing protein
3260 M M.Rso3882ORF3255P (1% identity) M.RsoT60ORF3260P
3265 S S.Rso3882ORF3255P (1% identity) S.RsoT60ORF3260P
3270 R Rso3882ORF3255P (1% identity) RsoT60ORF3260P
3275 362 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
20 IS5/IS1182 family transposase
??? M M.RsoT42ORF20P (1% identity) M.RsoT60ORF25P
30 DUF87 domain-containing protein
 
1075 98 aa hypothetical protein
??? M M1.RsoT25ORF1115P (1% identity) M1.RsoT60ORF1085P
??? M M.RsoT95ORF1060P (1% identity) M2.RsoT60ORF1085P
1095 278 aa hypothetical protein
 
1195 YOPP/AvrRxv family protein
1200 M M.RsoT95ORF1170P (1% identity) M.RsoT60ORF1200P
1205 1367 aa hypothetical protein
 
1440 71 aa hypothetical protein
??? M M1.Rso3882ORF1445P (1% identity) M1.RsoT60ORF1450P
??? M M2.Rso3882ORF1445P (1% identity) M2.RsoT60ORF1450P
1460 type III secretion system effector protein
 
1570 IS5/IS1182 family transposase
1575 M M.RsoT95ORF1170P (1% identity) M.RsoT60ORF1575P
1580 1367 aa hypothetical protein
 
7905 tryptophan synthase subunit beta
7910 M M.RsoYC40ORF1590P (1% identity) GTWWAC M.RsoT60ORF7910P
7915 tryptophan synthase subunit alpha
 
11750 Com family DNA-binding transcriptional
11755 M M.RsoT02ORFFP (0% identity) M.RsoT60ORF11755P
11760 68 aa hypothetical protein
 
??? M M.RsoT78ORF13155P (1% identity) M.RsoT60ORF13240P
13245 DNA-binding protein
 
13360 DUF86 domain-containing protein
13365 M M1.RsoT78ORF13280P (1% identity) M1.RsoT60ORF13365P
13370 M M2.RsoT78ORF13280P (1% identity) M2.RsoT60ORF13365P
13375 135 aa hypothetical protein
 
13895 1367 aa hypothetical protein
13900 M M.RsoYC40ORFBP (1% identity) M.RsoT60ORF13900P
13905 YOPP/AvrRxv family protein
 
plasmid unnamed
 
20935 118 aa hypothetical protein
??? M M1.Rso3882ORF20940P (1% identity) M1.RsoT60ORF20945P
20950 M M2.RsoT78ORF21055P (1% identity) M2.RsoT60ORF20945P
20955 121 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
100 bifunctional (p)ppGpp
105 R RsoT78MrrP (1% identity) RsoT60MrrP
110 0 aa hypothetical protein
 
3110 405 aa hypothetical protein
3115 R Rso3882McrBP (1% identity) RsoT60McrBP
3120 R Rso3882McrCP (1% identity) RsoT60McrCP
3125 161 aa hypothetical protein