Putative Ralstonia solanacearum T78 RM systems
Ref: Cho,H. et al. unpublished
REBASE ref # 27464
Sequence length: | GenBank #: | |
Chromosome: | 3,955,538 bp | CP022765 |
plasmid unnamed: | 2,063,152 bp | CP022766 |
REBASE acronym: RsoT78
Org_num: 31046
All begin CJO80_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
200 | Rrf2 family transcriptional regulator | |||
205 | M | M.RsoYQORF285P (100% identity) | M.RsoT78ORF205P | |
??? | R | RsoT60ORF210P (100% identity) | RsoT78ORF205P | |
220 | histidine kinase | |||
3075 | 65 aa hypothetical protein | |||
3080 | M | M1.Bps7509ORF3895P (96% identity) | M1.RsoT78ORF3080P | |
3085 | M | M2.BpsBEMII (86% identity) | M2.RsoT78ORF3080P | |
3090 | ATP-dependent endonuclease | |||
3095 | DNA helicase UvrD | |||
3100 | S | S.Pas1ORF11035P (79% identity) | S.RsoT78ORF3080P | |
3105 | R | Bth426IIIP (96% identity) | RsoT78ORF3080P | |
3110 | chromosome segregation protein SMC | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
15 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
20 | M | M.Rsp647ORF20P (100% identity) | M.RsoT78ORF20P | |
25 | DUF87 domain-containing protein | |||
1075 | 109 aa hypothetical protein | |||
1080 | M | M1.RsoT60ORF1450P (78% identity) | M.RsoT78ORF1080P | |
??? | DNA methylase N-4 | |||
1080 | DNA modification methylase | |||
??? | M | M1.RsoT42ORF12755P (99% identity) | M.RsoT78ORF1085P | |
1090 | type III secretion system effector protein | |||
1190 | DNA-binding protein | |||
??? | M | M.Rso10709ORF2845P (100% identity) | M.RsoT78ORF1195P | |
1200 | PIN domain-containing protein | |||
1945 | Com family DNA-binding transcriptional | |||
1950 | M | M.RsoRSCMORF2070P (100% identity) | M.RsoT78ORF1950P | |
1960 | XRE family transcriptional regulator | |||
7590 | tryptophan synthase subunit beta | |||
7595 | M | M.Rsp647ORF10140P (100% identity) | GTWWAC | M.RsoT78ORF7595P |
7600 | tryptophan synthase subunit alpha | |||
8710 | 77 aa hypothetical protein | |||
8715 | M | M.Rso715ORFBP (90% identity) | M.RsoT78ORF8715P | |
8720 | 80 aa hypothetical protein | |||
11665 | Com family DNA-binding transcriptional | |||
11670 | M | M.RsoHA41ORFBP (77% identity) | M.RsoT78ORF11670P | |
11675 | 68 aa hypothetical protein | |||
13155 | M | M.Rsp650ORF13560P (100% identity) | M.RsoT78ORF13155P | |
13160 | DNA-binding protein | |||
13275 | DUF86 domain-containing protein | |||
13280 | M | M2.Rsp647ORF4655P (100% identity) | M1.RsoT78ORF13280P | |
13285 | M | M2.Rsp650ORF13700P (100% identity) | M2.RsoT78ORF13280P | |
13290 | 135 aa hypothetical protein | |||
13810 | 1367 aa hypothetical protein | |||
13815 | M | M.RsoYQORF1280P (100% identity) | M.RsoT78ORF13815P | |
13820 | YOPP/AvrRxv family protein | |||
plasmid unnamed | ||||
21050 | group II intron reverse transcriptase/maturase | |||
21055 | M | M1.RsoT60ORF20945P (82% identity) | M1.RsoT78ORF21055P | |
21060 | M | M2.RsoT60ORF20945P (100% identity) | M2.RsoT78ORF21055P | |
21065 | 121 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
95 | bifunctional (p)ppGpp | |||
100 | R | RsoYQMrrP (100% identity) | RsoT78MrrP | |
105 | 0 aa hypothetical protein |