Salmonella enterica subsp. enterica serovar Typhimurium D23580 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium D23580 RM systems
Ref: Predeus V,A. unpublished
REBASE ref # 27463
| Sequence length: | GenBank #: | |
| chromosome D23580_liv_o: | 4,879,402 bp | LS997973 |
| plasmid D23580_liv_pSLT-BT: | 116,575 bp | LS997974 |
REBASE acronym: SenD23580
Org_num: 31036
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome D23580_liv_o | ||||
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenD23580ORFCP |
| ??? | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenD23580ORFCP |
| ??? | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenD23580ORFCP |
| ??? | methylated adenine and cytosine restriction protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome D23580_liv_o | ||||
| ??? | V | V.StyUK1DcmP (100% identity) | V.SenD23580DcmP | |
| ??? | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenD23580DcmP |
| ??? | M | M.StyUK1V (100% identity) | GATC | M.SenD23580ORFAP |
| ??? | M | M.StyUK1III (100% identity) | ATGCAT | M.SenD23580ORFBP |
| ??? | M | M.StyTDamP (100% identity) | GATC | M.SenD23580DamP |
| ??? | RM | StyUK1IV (100% identity) | GATCAG | SenD23580ORFEP |
| plasmid D23580_liv_pSLT-BT | ||||
| ??? | M | M.StyUK1ORFAP (100% identity) | M.SenD23580ORFDP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome D23580_liv_o | ||||
| ??? | M | M.StyUK1I (100% identity) | CAGAG | M.SenD23580ORFFP |
| ??? | R | StyUK1IP (99% identity) | CAGAG | SenD23580ORFFP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome D23580_liv_o | ||||
| ??? | type I restriction-modification system endonuclease | |||
| ??? | R | StyUK1MrrP (100% identity) | SenD23580MrrP | |