Clostridioides difficile DSM 28196 |
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Putative Clostridioides difficile DSM 28196 RM systems
Ref: Riedel,T. et al. Int. J. Med. Microbiol. 307 (6), 311-320 (2017)
REBASE ref # 27454
Complete sequence: 4,205,365 bp
GenBank #: CP012320
REBASE acronym: Cdi28196
Org_num: 31013
All begin CDIF28196_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3183 | 687 aa hypothetical protein | |||
| 3184 | R | Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | Cdi28196ORF3189P |
| 3185 | 142 aa hypothetical protein | |||
| 3186 | DNA polymerase subunit beta | |||
| 3187 | 102 aa hypothetical protein | |||
| 3188 | S | S.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | S.Cdi28196ORF3189P |
| 3189 | M | M.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | M.Cdi28196ORF3189P |
| 3190 | tagatose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2866 | phospholipase | |||
| 2867 | M | M.Cdo072ORF14340P (100% identity) | CAAAAA | M.Cdi28196ORF2867P |
| 2868 | badm/rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2170 | sigma-54-dependent transcriptional regulator | |||
| 2171 | R | Cdo072McrCP (100% identity) | Cdi28196McrCP | |
| 2172 | R | Cdo072McrBP (100% identity) | Cdi28196McrBP | |
| 2173 | cell division protein FtsZ | |||