Novosphingobium species THN1 |
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Putative Novosphingobium species THN1 RM systems
Ref: Wang,J.P. unpublished
REBASE ref # 27451
Complete sequence: 3,487,514 bp
GenBank #: CP028347
REBASE acronym: NspTHN1
Org_num: 30999
All begin C7W88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3000 | DNA-binding protein | |||
| 3005 | R | AspH2ORF9325P (95% identity) | GAYCNNNNNRTTC | NspTHN1IP |
| 3010 | S | S.Bpa21ORFBP (58% identity) | GAYCNNNNNRTTC | S.NspTHN1I |
| 3015 | anticodon nuclease | |||
| 3020 | M | M.SbaLL03ORF21605P (82% identity) | GAYCNNNNNRTTC | M.NspTHN1I |
| 3025 | 403 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4490 | 578 aa hypothetical protein | |||
| 4495 | RM | SspVSS1ORF1575P (64% identity) | NspTHN1ORF4495P | |
| 4500 | helicase | |||
| 9470 | 554 aa hypothetical protein | |||
| 9475 | M | M.Pfl2012ORF11040P (57% identity) | M.NspTHN1ORF9475P | |
| 9480 | V | V.SspFD7ORF1507P (61% identity) | V.NspTHN1ORF9475P | |
| 9485 | 0 aa hypothetical protein | |||
| 12030 | ribonuclease HII | |||
| 12035 | M | M.NarDORF1840P (95% identity) | GANTC | M.NspTHN1II |
| 12040 | dihydropteroate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | 631 aa hypothetical protein | |||
| 1760 | M | M.Nca3ORF17700P (73% identity) | M.NspTHN1ORF1760P | |
| ??? | R | NspHII3ORFHP (63% identity) | NspTHN1ORF1760P | |
| 1770 | 545 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4510 | WYL domain-containing protein | |||
| ??? | R | NarDMcrCP (37% identity) | NspTHN1McrBCP | |
| 4525 | R | NspTHN1McrBCP (22% identity) | NspTHN1McrBP | |
| 4540 | DUF2779 domain-containing protein | |||