Escherichia coli E706 |
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Putative Escherichia coli E706 RM systems
Ref: Zhao,S. et al. unpublished
REBASE ref # 27448
| Sequence length: | GenBank #: | |
| Chromosome: | 4,696,142 bp | CP029687 |
| plasmid pLKJULY7989: | 151,879 bp | CP029688 |
REBASE acronym: EcoE706
Org_num: 30988
All begin DMI84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10395 | 410 aa hypothetical protein | |||
| 10400 | M | M.EcoS1632ORFHP (100% identity) | M.EcoE706ORF10400P | |
| ??? | S | S.EcoP61ORF9315P (100% identity) | S.EcoE706ORF10400P | |
| 10415 | R | EcoS1632ORFHP (100% identity) | EcoE706ORF10400P | |
| 10420 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | protein DamX | |||
| 1795 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE706DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2450 | DUF2556 domain-containing protein | |||
| 2455 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoE706ORF2455P |
| 2460 | site-specific integrase | |||
| 5740 | TraR/DksA family transcriptional regulator | |||
| 5745 | M | M.Sen24760ORF10410P (73% identity) | M.EcoE706ORF5745AP | |
| 5750 | IS3 family transposase | |||
| 5755 | M | DNA adenine methylase | M.EcoE706ORF5745BP | |
| 5760 | endonuclease | |||
| 9530 | recombination protein NinB | |||
| 9535 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoE706ORF9535P |
| 9540 | NinE family protein | |||
| 10060 | HD domain-containing protein | |||
| 10065 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoE706DcmP |
| 10070 | V | V.SflSTLE3DcmP (100% identity) | V.EcoE706DcmP | |
| 10075 | drug/metabolite exporter YedA | |||
| 16400 | replication endonuclease | |||
| 16405 | M | M.EcoS1632ORFIP (100% identity) | GATC | M.EcoE706ORF16405P |
| 16410 | TraR/DksA family transcriptional regulator | |||
| 19615 | phage holin, lambda family | |||
| 19620 | M | M.EcoS6685ORFBBP (100% identity) | M.EcoE706ORF19620P | |
| 19625 | 67 aa hypothetical protein | |||
| 19655 | LexA family transcriptional regulator | |||
| 19660 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.EcoE706ORF19660P |
| 19665 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pLKJULY7989 | ||||
| 25005 | DUF4391 domain-containing protein | |||
| 25010 | M | M.EcoHS301ORF23870P (100% identity) | M.EcoE706ORF25010P | |
| 25015 | R | EcoHS301ORF23870P (100% identity) | EcoE706ORF25010P | |
| 25020 | recombinase RecA | |||