Vibrio species dhg |
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Putative Vibrio species dhg RM systems
Ref: Lim,H.G. et al. unpublished
REBASE ref # 27450
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,349,595 bp | CP028943 |
| plasmid unnamed1: | 143,489 bp | CP028945 |
REBASE acronym: Vspdhg
Org_num: 30993
All begin DBX26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1770 | 625 aa hypothetical protein | |||
| 1775 | S | S.Vpa117ORF2925P (99% identity) | S.VspdhgORF1780P | |
| 1780 | M | M.Vpa117ORF2925P (100% identity) | M.VspdhgORF1780P | |
| 1785 | multidrug transporter | |||
| 1790 | 428 aa hypothetical protein | |||
| 1795 | R | Vpa117ORF2925P (98% identity) | VspdhgORF1780P | |
| 1800 | 0 aa hypothetical protein | |||
| 11815 | 187 aa hypothetical protein | |||
| 11820 | R | ValYM4ORF23620P (98% identity) | VspdhgORF11835P | |
| 11825 | anticodon nuclease | |||
| 11830 | S | S.AseAS80ORF14295P (97% identity) | S.VspdhgORF11835P | |
| 11835 | M | M.Vch74ORF3352P (99% identity) | M.VspdhgORF11835P | |
| 11840 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13670 | ribulose-phosphate 3-epimerase | |||
| 13675 | M | M.VspEJY3DamP (100% identity) | GATC | M.VspdhgDamP |
| 13680 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 24780 | 209 aa hypothetical protein | |||
| 24785 | M | DNA cytosine methyltransferase | M.VspdhgORF24785P | |
| 24790 | 124 aa hypothetical protein | |||
| 25320 | IS3 family transposase | |||
| 25325 | M | M.VowVC2WORF33040P (98% identity) | M.VspdhgORF25325P | |
| 25330 | R | VowVC2WORF33040P (99% identity) | VspdhgORF25325P | |
| 25335 | 83 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1815 | transcriptional regulator | |||
| 1820 | R | Vpa117MrrP (100% identity) | VspdhgMrrP | |
| 1825 | 202 aa hypothetical protein | |||