Pseudoalteromonas piscicida DE1-A |
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Putative Pseudoalteromonas piscicida DE1-A RM systems
Ref: Richards,G.P. et al. unpublished
REBASE ref # 27400
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,165,978 bp | CP031759 |
| chromosome 2: | 1,261,888 bp | CP031760 |
REBASE acronym: PpiDE1A
Org_num: 30862
All begin D0N37_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 16920 | DUF2970 domain-containing protein | |||
| 16925 | M | M.PpiDE2BDamP (100% identity) | M.PpiDE1ADamP | |
| 16930 | cell division protein DamX | |||
| chromosome 2 | ||||
| 23430 | dGTPase | |||
| 23435 | R | PpiWJX06DptFP (93% identity) | PpiDE1ADptFP | |
| 23440 | DNA phosphorothioation-dependent restriction | |||
| 23435 | DNA phosphorothioation-dependent restriction | |||
| 23440 | R | PpiWJX06DptGP (93% identity) | PpiDE1ADptGP | |
| 23445 | DNA phosphorothioation-dependent restriction | |||
| 23440 | DNA phosphorothioation-dependent restriction | |||
| 23445 | R | PpiWJX06DptHP (95% identity) | PpiDE1ADptHP | |
| 23450 | 325 aa hypothetical protein | |||
| 23465 | 147 aa hypothetical protein | |||
| 23470 | M | M.PpiWJX06DndEP (91% identity) | M.PpiDE1ADndEP | |
| 23475 | DNA sulfur modification protein DndD | |||
| 23470 | DNA sulfur modification protein DndE | |||
| 23475 | M | M.PpiWJX06DndDP (97% identity) | M.PpiDE1ADndDP | |
| 23480 | DNA phosphorothioation system sulfurtransferase | |||
| 23475 | DNA sulfur modification protein DndD | |||
| 23480 | M | M.PpiWJX06DndCP (98% identity) | M.PpiDE1ADndCP | |
| 23485 | DNA sulfur modification protein DndB | |||
| 23480 | DNA phosphorothioation system sulfurtransferase | |||
| 23485 | M | M.PpiWJX06DndBP (95% identity) | M.PpiDE1ADndBP | |
| 23490 | cysteine desulfurase DndA | |||
| 23485 | DNA sulfur modification protein DndB | |||
| 23490 | M | M.Ppi20779DndAP (84% identity) | M.PpiDE1ADndAP | |
| 23495 | 110 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 16560 | 267 aa hypothetical protein | |||
| ??? | R | Yru10587ORF15175P (85% identity) | PpiDE1AORF16575P | |
| 16575 | M | M.Yru10587ORF15175P (80% identity) | M.PpiDE1AORF16575P | |
| 16580 | DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 15505 | YicC family protein | |||
| 15510 | R | ShaHORF418P (83% identity) | PpiDE1AORF15510P | |
| 15600 | 203 aa hypothetical protein | |||
| 15605 | R | PpiDE2AORF3495P (99% identity) | PpiDE1AORF15605P | |
| 15610 | 77 aa hypothetical protein | |||