Klebsiella pneumoniae subsp. pneumoniae M5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae subsp. pneumoniae M5 RM systems
Ref: Lee,H. and Ko,K.S. unpublished
REBASE ref # 27397
| Sequence length: | GenBank #: | |
| Chromosome: | 5,374,875 bp | CP031734 |
| plasmid pKPM501: | 253,531 bp | CP031735 |
| plasmid pKPM502: | 250,351 bp | CP031736 |
REBASE acronym: KpnM5
Org_num: 30852
All begin D0S46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 945 | DNA-binding protein | |||
| 950 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | KpnM5ORF975P |
| 955 | histidinol-phosphatase | |||
| 960 | ATP-dependent DNA helicase RecG | |||
| 965 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.KpnM5ORF975P |
| 970 | anticodon nuclease | |||
| 975 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.KpnM5ORF975P |
| 980 | 400 aa hypothetical protein | |||
| 23145 | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.KpnM5ORF23150P |
| 23150 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.KpnM5ORF23150P |
| 23155 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | KpnM5ORF23150P |
| 23160 | DUF4102 domain-containing protein | |||
| plasmid pKPM501 | ||||
| 27380 | M48 family peptidase | |||
| 27385 | R | SmaQC11ORF51970P (100% identity) | GATGNNNNNNTTG | KpnM5ORF27400P |
| 27390 | YecA family protein | |||
| 27395 | S | S.Kva2757ORF27000P (100% identity) | GATGNNNNNNTTG | S.KpnM5ORF27400P |
| 27400 | M | M.SmaQC11ORF51970P (100% identity) | GATGNNNNNNTTG | M.KpnM5ORF27400P |
| 27405 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1495 | cell division protein DamX | |||
| 1500 | M | M.Kpnst68DamP (100% identity) | GATC | M.KpnM5DamP |
| 1505 | ribulose-phosphate 3-epimerase | |||
| 9015 | phosphohydrolase | |||
| 9020 | M | M.Ksp1954ORF23690P (100% identity) | CCWGG | M.KpnM5ORF9020P |
| 9025 | very short patch repair endonuclease | |||
| 9020 | DNA cytosine methyltransferase | |||
| 9025 | V | V.KspC31DcmP (75% identity) | V.KpnM5DcmP | |
| 9030 | drug/metabolite exporter YedA | |||
| 9295 | 75 aa hypothetical protein | |||
| 9300 | M | M.Kpnst68ORF20290P (100% identity) | M.KpnM5ORF9300P | |
| 9305 | exonuclease | |||
| 16005 | replication endonuclease | |||
| 16010 | M | M.Kpnst68ORF1125P (100% identity) | M.KpnM5ORF16010P | |
| 16015 | 75 aa hypothetical protein | |||
| plasmid pKPM501 | ||||
| 27980 | IS1 family transposase | |||
| 27985 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KpnM5ORF27985P |
| 27990 | R | YpsR1ORFAP (99% identity) | CCWGG | KpnM5ORF27985P |
| 27995 | resolvase | |||
| plasmid pKPM502 | ||||
| 29190 | 1126 aa hypothetical protein | |||
| 29195 | M | M.Kqu610ORF26075P (100% identity) | M.KpnM5ORF29195P | |
| 29200 | 170 aa hypothetical protein | |||
| 29260 | 82 aa hypothetical protein | |||
| 29265 | R | Kpnst68ORF27050P (100% identity) | KpnM5ORF29270P | |
| 29270 | M | M.Kqu645ORF52040P (100% identity) | M.KpnM5ORF29270P | |
| 29275 | DNA replication protein DnaC | |||