Salmonella enterica subsp. enterica serovar Typhimurium WG49 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium WG49 RM systems
Ref: Bothma,L. et al. unpublished
REBASE ref # 27217
Contig set: 4,868,255 bp
GenBank #: PXZB00000000 (NZ_PXZB00000000)
REBASE acronym: SenWG49
Org_num: 30815
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 328 | 104 aa hypothetical protein | |||
| 330 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | SenWG49ORFDP |
| 336 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenWG49ORFDP |
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenWG49ORFDP |
| 346 | 93 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | DNA adenine methylase | |||
| 12 | M | M.StyTDamP (100% identity) | GATC | M.SenWG49DamP |
| 13 | DamX protein | |||
| 21 | 102 aa hypothetical protein | |||
| 24 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenWG49ORFAP |
| 26 | tRNA-dihydrouridine synthase B | |||
| 61 | 101 aa hypothetical protein WKY_01100 | |||
| 63 | M | M.SflN92ORF24820P (100% identity) | M.SenWG49ORFEP | |
| 66 | DNA methylase family protein, partial | |||
| 85 | Carboxylate/amino acid/amine transporter | |||
| 86 | V | V.StyUK1DcmP (100% identity) | V.SenWG49DcmP | |
| 87 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenWG49DcmP |
| 89 | 91 aa hypothetical protein | |||
| 421 | 106 aa hypothetical protein | |||
| 422 | RM | StyUK1IV (100% identity) | GATCAG | SenWG49ORFCP |
| 426 | ATP-binding cassette domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1120 | cytochrome d ubiquinol oxidase subunit I | |||
| 1122 | R | StyUK1IP (100% identity) | CAGAG | SenWG49ORFBP |
| 1124 | M | M.StyUK1I (100% identity) | CAGAG | M.SenWG49ORFBP |
| 1125 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 326 | 62 aa hypothetical protein | |||
| 327 | R | StyUK1MrrP (100% identity) | SenWG49MrrP | |
| 329 | Uncharacterised protein | |||