Haemophilus influenzae P652-8881 |
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Putative Haemophilus influenzae P652-8881 RM systems
Ref: Moleres,J. and Ehrlich,R. unpublished
REBASE ref # 27385
Complete sequence: 1,811,303 bp
GenBank #: CP031684
REBASE acronym: Hin8881
Org_num: 30733
All begin CH613_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4300 | DUF417 domain-containing protein | |||
| 4305 | R | HinIII3ORF8050P (100% identity) | ACANNNNNNRTTG | Hin8881ORF4325P |
| 4310 | hydroxyacid dehydrogenase | |||
| 4315 | anticodon nuclease | |||
| 4320 | S | S.HinIII1ORF8070P (100% identity) | ACANNNNNNRTTG | S.Hin8881ORF4325P |
| 4325 | M | M.HinIII3ORF8050P (100% identity) | ACANNNNNNRTTG | M.Hin8881ORF4325P |
| 4330 | oligopeptidase A | |||
| 4900 | signal recognition particle protein | |||
| 4905 | R | HinR535ORF4005P (100% identity) | Hin8881ORF4920P | |
| ??? | S | S.HinEEORF2765P (100% identity) | S.Hin8881ORF4920P | |
| 4915 | ATPase | |||
| 4920 | M | M.HinR535ORF4005P (100% identity) | M.Hin8881ORF4920P | |
| 4925 | Nif3-like dinuclear metal center hexameric | |||
| 6280 | translation initiation factor IF-2 | |||
| 6285 | R | HinIII3ORF13340P (100% identity) | Hin8881ORF6300P | |
| 6290 | 345 aa hypothetical protein | |||
| 6295 | S | S.HinR535ORF90P (100% identity) | S.Hin8881ORF6300P | |
| 6300 | M | M.HinR535ORF90P (100% identity) | M.Hin8881ORF6300P | |
| 6305 | 30S ribosome-binding factor RbfA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3475 | chemotaxis protein | |||
| 3480 | R | HinIII3ORF6560P (100% identity) | Hin8881ORF3485P | |
| ??? | M | M.Hin8603ORF3420P (100% identity) | M.Hin8881ORF3485P | |
| 3490 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 7560 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 7565 | M | M.HinIII5ORF14360P (100% identity) | M.Hin8881ORF7565P | |
| 7570 | R | HinR2846ORFAP (100% identity) | Hin8881ORF7565P | |
| 7575 | replication-associated recombination protein A | |||
| 7850 | IS3 family transposase | |||
| 7855 | M | M.HinR2846ORFBP (100% identity) | M.Hin8881ORF7855P | |
| 7860 | R | HinR2846ORFBP (100% identity) | Hin8881ORF7855P | |
| 7865 | YcjX family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8715 | ribonuclease HII | |||
| 8720 | M | M.HinIII3ORF16370P (100% identity) | M.Hin8881ORF8720P | |
| 8725 | R | HinIII3ORF16370P (100% identity) | Hin8881ORF8720P | |
| 8730 | carboxymuconolactone decarboxylase family | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4350 | phosphatase PAP2 family protein | |||
| 4355 | M | M.HinIII3ORF8110P (100% identity) | GATC | M.Hin8881ORF4355P |
| 4360 | 3-dehydroquinate synthase | |||