Escherichia coli cq9 |
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Putative Escherichia coli cq9 RM systems
Ref: Bai,L. unpublished
REBASE ref # 27367
| Sequence length: | GenBank #: | |
| Chromosome: | 5,184,499 bp | CP031546 |
| plasmid unnamed1: | 243,642 bp | CP031547 |
| plasmid unnamed2: | 221,041 bp | CP031548 |
| plasmid unnamed3: | 189,020 bp | CP031549 |
REBASE acronym: Ecocq9
Org_num: 30684
All begin DS732_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4130 | endoribonuclease SymE | |||
| 4135 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Ecocq9ORF4140P |
| 4140 | M | M.EcoU90ORF3805P (100% identity) | TGANNNNNNNNTGCT | M.Ecocq9ORF4140P |
| 4145 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Ecocq9ORF4140P |
| 4150 | restriction endonuclease | |||
| 19970 | ABC transporter | |||
| 19975 | R | Kpnb12LORF3425P (100% identity) | Ecocq9ORF19985P | |
| 19980 | S | S.Kpnb12LORF3425P (100% identity) | S.Ecocq9ORF19985P | |
| 19985 | M | M.Kpnb12LORF3425P (100% identity) | M.Ecocq9ORF19985P | |
| 19990 | GTPase family protein | |||
| 22030 | 293 aa hypothetical protein | |||
| 22035 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Ecocq9ORF22040P |
| 22040 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Ecocq9ORF22040P |
| 22045 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Ecocq9ORF22040P |
| 22050 | 65 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4430 | DUF262 domain-containing protein | |||
| 4435 | RM | SflLIN6ORF19750P (100% identity) | Ecocq9ORF4435P | |
| 4440 | BREX-1 system phosphatase PglZ type A | |||
| 15565 | EamA family transporter | |||
| 15570 | V | V.SflFF59DcmP (100% identity) | V.Ecocq9DcmP | |
| 15575 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Ecocq9DcmP |
| 15580 | phosphohydrolase | |||
| 19445 | Shiga toxin Stx2 subunit A | |||
| 19465 | M | M.EcoU90ORF18560P (100% identity) | M.Ecocq9ORF19465P | |
| 19470 | TrmB family transcriptional regulator | |||
| 24050 | Fis family transcriptional regulator | |||
| 24055 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Ecocq9ORF24055P |
| 24060 | DUF2556 domain-containing protein | |||
| 24710 | ribulose-phosphate 3-epimerase | |||
| 24715 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecocq9DamP |
| 24720 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 27335 | DUF1173 family protein | |||
| 27340 | M | M.YpsF1ORFCP (100% identity) | M.Ecocq9ORF27340P | |
| 27345 | thermonuclease family protein | |||
| 27765 | 108 aa hypothetical protein | |||
| 27770 | M | M.YpsF1ORFBP (100% identity) | M.Ecocq9ORF27770P | |
| 27775 | 202 aa hypothetical protein | |||
| 27930 | DNA-binding protein | |||
| 27935 | M | M.YpsF1ORFDP (100% identity) | M.Ecocq9ORF27935P | |
| 27940 | 284 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 29045 | 73 aa hypothetical protein | |||
| 29050 | M | M.EcoW25KORF21020P (100% identity) | M.Ecocq9ORF29050P | |
| 29055 | reverse transcriptase | |||
| 29705 | 73 aa hypothetical protein | |||
| 29710 | M | M.EcoE94ORF27330P (100% identity) | M.Ecocq9ORF29710P | |
| 29715 | DUF1281 domain-containing protein | |||
| plasmid unnamed3 | ||||
| 30170 | 100 aa hypothetical protein | |||
| 30175 | M | M.SenHNK130ORF185P (100% identity) | M.Ecocq9ORF30175P | |
| 30180 | 158 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4120 | R | Ssp28760McrCP (100% identity) | Ecocq9McrCP | |
| 4125 | R | Ssp28760McrBP (100% identity) | Ecocq9McrBP | |
| 4130 | endoribonuclease SymE | |||
| 4145 | type I restriction-modification system | |||
| 4150 | R | Ssp28760MrrP (100% identity) | Ecocq9MrrP | |
| 4155 | GTPase | |||