Pseudomonas aeruginosa Y82 |
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Putative Pseudomonas aeruginosa Y82 RM systems
Ref: Yoon,S. and Hwang,W. unpublished
REBASE ref # 27329
Complete sequence: 7,106,857 bp
GenBank #: CP030912
REBASE acronym: PaeY82
Org_num: 30507
All begin Y82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 279 | 94 aa hypothetical protein | |||
| 280 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.PaeY82ORF280P |
| ??? | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.PaeY82ORF280P |
| 282 | transcriptional regulator | |||
| 283 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | PaeY82ORF280P |
| 284 | Transposase | |||
| 2457 | MerR family transcriptional regulator | |||
| 2458 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.PaeY82ORF2458P |
| 2459 | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.PaeY82ORF2458P |
| 2460 | Methyl-accepting chemotaxis protein | |||
| 2465 | McrBC 5-methylcytosine restriction system | |||
| 2466 | R | PaesAG1ORF2679P (100% identity) | PaeY82ORF2466P | |
| 2467 | Transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4437 | Nucleoid-associated protein | |||
| 4438 | M | M.Psp2021ORF21530P (100% identity) | M.PaeY82ORF4438P | |
| 4439 | DNA-binding protein | |||
| 4655 | 82 aa hypothetical protein | |||
| 4656 | R | PmeTTORFEP (100% identity) | CTCGAG | PaeY82ORF4657P |
| ??? | M | M.PmeTTORFEP (100% identity) | CTCGAG | M.PaeY82ORF4657P |
| 4658 | IS6100 transposase | |||
| 5190 | nucleoid-associated protein YejK | |||
| 5191 | M | M.PspAK6UORFCP (100% identity) | M.PaeY82ORF5191P | |
| 5192 | DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4702 | ATP-dependent endonuclease | |||
| 4703 | R | Pae406ORF12800P (100% identity) | PaeY82ORF4704P | |
| 4704 | M | M.PspP16ORFGP (100% identity) | M.PaeY82ORF4704P | |
| 4705 | 707 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2463 | SNF2 helicase | |||
| 2464 | R | Psp2021McrBP (67% identity) | PaeY82McrBP | |
| 2465 | R | PaesAG1McrCP (100% identity) | PaeY82McrCP | |
| 2466 | Type I restriction-modification enzyme, R | |||