Escherichia coli ST410 |
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Putative Escherichia coli ST410 RM systems
Ref: Ayibieke,A. and Saito,R. unpublished
REBASE ref # 27310
| Sequence length: | GenBank #: | |
| Chromosome: | 4,689,576 bp | CP029630 |
| plasmid p2189-NDM: | 248,807 bp | CP029631 |
REBASE acronym: Eco410
Org_num: 30451
All begin DL559_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14640 | IS1 family transposase | |||
| 14645 | R | Sen12509ORF5865P (100% identity) | Eco410ORF14655P | |
| 14650 | S | S.Eco1701ORF5620P (100% identity) | S.Eco410ORF14655P | |
| 14655 | M | M.SenS688ORF13495P (100% identity) | M.Eco410ORF14655P | |
| 14660 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10580 | protein DamX | |||
| 10585 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco410DamP |
| 10590 | ribulose-phosphate 3-epimerase | |||
| 11235 | DUF2556 domain-containing protein | |||
| 11240 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco410ORF11240P |
| 11245 | Fis family transcriptional regulator | |||
| 18305 | phosphohydrolase | |||
| 18310 | M | M.EcoteDDcmP (100% identity) | CCWGG | M.Eco410ORF18310P |
| 18315 | very short patch repair endonuclease | |||
| 18310 | DNA cytosine methyltransferase | |||
| 18315 | V | V.SsoST152DcmP (100% identity) | V.Eco410DcmP | |
| 18320 | drug/metabolite exporter YedA | |||
| plasmid p2189-NDM | ||||
| 24505 | thermonuclease family protein | |||
| 24510 | M | M.StypAKU1ORFCP (100% identity) | M.Eco410ORF24510P | |
| 24515 | 56 aa hypothetical protein | |||
| 25360 | 273 aa hypothetical protein | |||
| 25365 | M | M.Ype21801ORF197P (100% identity) | M.Eco410ORF25365P | |
| 25370 | DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22530 | isocitrate dehydrogenase | |||
| 22535 | R | EcosEC27McrCP (100% identity) | Eco410McrCP | |
| 22540 | R | EcoteDMcrBP (100% identity) | Eco410McrBP | |
| 22545 | DNA-invertase | |||