Sphingomonas species FARSPH |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Sphingomonas species FARSPH RM systems
Ref: Bendezu Eguis,J. et al. unpublished
REBASE ref # 28231
| Sequence length: | GenBank #: | |
| Chromosome: | 3,345,474 bp | CP029985 |
| plasmid unnamed2: | 265,221 bp | CP029986 |
REBASE acronym: SspRSPH
Org_num: 30402
All begin DM480_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5855 | 193 aa hypothetical protein | |||
| 5860 | R | Psp29334ORF21590P (66% identity) | TGANNNNNNNGTCC | SspRSPHIP |
| 5865 | S | S.Ssp34061ORFBP (34% identity) | TGANNNNNNNGTCC | S.SspRSPHI |
| 5870 | 200 aa hypothetical protein | |||
| 5875 | M | M.AspTH136ORF5855P (77% identity) | TGANNNNNNNGTCC | M.SspRSPHI |
| 5880 | IS66 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7915 | ribonuclease HII | |||
| 7920 | M | M.Sin12872ORFCP (83% identity) | GANTC | M.SspRSPHII |
| 7925 | dihydropteroate synthase | |||
| 8995 | TonB-dependent receptor | |||
| 9000 | RM | Sspzrk23ORF5020P (66% identity) | SspRSPHORF9000P | |
| 9005 | 132 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3550 | recombinase family protein | |||
| 3555 | M | M.Asp13ORF9978P (69% identity) | M.SspRSPHORF3555P | |
| 3560 | R | AatORFBP (90% identity) | SspRSPHORF3555P | |
| 3565 | 110 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 15940 | chromosome partitioning protein | |||
| ??? | M | M.AprL41AORFIP (26% identity) | M.SspRSPHORFAP | |
| 15950 | chromosome partitioning protein | |||