Arcobacter marinus SH-4D_Col1 |
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Putative Arcobacter marinus SH-4D_Col1 RM systems
Ref: Varghese,N. and Submissions,S. unpublished
REBASE ref # 27140
Contig set: 2,818,669 bp
GenBank #: FUYO00000000 (NZ_FUYO00000000)
REBASE acronym: AmaSH4D
Org_num: 30381
All begin SAMN06295997_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10412 | adenine-specific DNA-methyltransferase | |||
| 10413 | S | S.CtaCM022ORF25280P (57% identity) | S.AmaSH4DORF10413P | |
| 10414 | type III restriction enzyme | |||
| 103146 | DNA repair protein RadC | |||
| 103147 | M | M.AmaH16ORF13014P (100% identity) | M.AmaSH4DORF103147P | |
| 103148 | S | S2.AmaH16ORF13014P (100% identity) | S1.AmaSH4DORF103147P | |
| 103149 | S | S1.AmaH16ORF13014P (100% identity) | S2.AmaSH4DORF103147P | |
| 103150 | R | AmaH16ORF13014P (100% identity) | AmaSH4DORF103147P | |
| 103151 | adenylyltransferase and sulfurtransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10236 | Predicted DNA binding protein, CopG/RHH family | |||
| 10237 | M | M.AmaH16ORF10639P (100% identity) | M.AmaSH4DORF10237P | |
| 10238 | R | 398 aa hypothetical protein | AmaSH4DORF10237P | |
| 10239 | manganese-dependent inorganic pyrophosphatase | |||
| 10646 | ATP-binding cassette, subfamily F, member 3 | |||
| 10647 | M | M.AmaH16ORF10737P (100% identity) | M.AmaSH4DORF10647P | |
| 10648 | R | AmaH16ORF10737P (100% identity) | AmaSH4DORF10647P | |
| 10649 | Endonuclease IV | |||
| 105106 | 130 aa hypothetical protein | |||
| 105107 | M | M.AmaH16ORF101261P (100% identity) | M.AmaSH4DORF105107P | |
| 105108 | 249 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10411 | protein of unknown function | |||
| 10412 | M | AmaH16ORF1043P (14% identity) | M.AmaSH4DORF10412P | |
| 10413 | Predicted nuclease of restriction | |||
| 10414 | R | AmaH16ORF1043P (73% identity) | AmaSH4DORF10412P | |
| 10415 | transcriptional repressor C-terminal | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11646 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 11647 | R | Abi26154McrBP (80% identity) | AmaSH4DMcrBP | |
| 11648 | Predicted nuclease of restriction | |||
| 11649 | R | Aca29148McrCP (98% identity) | AmaSH4DMcrCP | |
| 11650 | 202 aa hypothetical protein | |||