Neisseria bergeri C2008000329 |
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Putative Neisseria bergeri C2008000329 RM systems
Ref: Nichols,M. et al. unpublished
REBASE ref # 27132
Contig set: 2,256,858 bp
GenBank #: POWZ00000000 (NZ_POWZ00000000)
REBASE acronym: Nbe329
Org_num: 30368
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11 | 103 aa hypothetical protein | |||
| 12 | M | M.Nbe328ORFBP (100% identity) | M.Nbe329ORFDP | |
| 16 | 71 aa hypothetical protein | |||
| 25 | sulfatase family protein | |||
| 28 | M | M.Nbe328ORFEP (100% identity) | M.Nbe329ORFFP | |
| 29 | R | Nbe328ORFEP (100% identity) | Nbe329ORFFP | |
| 30 | ATP-dependent RNA helicase HrpA | |||
| 61 | 97 aa hypothetical protein | |||
| 64 | RM | Nbe328ORFOP (100% identity) | Nbe329ORFNP | |
| 72 | 62 aa hypothetical protein | |||
| 79 | carbamoyl-phosphate synthase large subunit | |||
| 86 | M | M.Nsu2238ORFAP (100% identity) | M.Nbe329ORFCP | |
| 87 | R | Nsu2238ORFAP (100% identity) | Nbe329ORFCP | |
| 88 | membrane protein | |||
| 144 | 100 aa hypothetical protein | |||
| 145 | M | M.Ngo14ORF82P (100% identity) | RGCGCY | M.Nbe329ORFAP |
| 146 | R | Nbe328ORFCP (100% identity) | RGCGCY | Nbe329ORFAP |
| 147 | Uncharacterised protein | |||
| 166 | Uncharacterised protein | |||
| 168 | C | C.Npo18661ORFJP (100% identity) | C.Nbe329ORFMP | |
| 169 | R | Nbe328ORFNP (100% identity) | Nbe329ORFMP | |
| 170 | M | M.Nbe328ORFNP (100% identity) | M.Nbe329ORFMP | |
| 172 | outer membrane protein P1 | |||
| 264 | 61 aa hypothetical protein | |||
| 265 | R | Nbe328ORFDP (100% identity) | Nbe329ORFBP | |
| 267 | 70 aa hypothetical protein | |||
| 303 | 86 aa hypothetical protein | |||
| 304 | M | M.Nbe328DndCP (100% identity) | M.Nbe329DndCP | |
| 307 | 81 aa hypothetical protein | |||
| 267 | 117 aa hypothetical protein NMY233_1482 | |||
| 268 | RM | Nbe328ORFAP (100% identity) | GCGGAG | Nbe329ORFEP |
| 280 | 60 aa hypothetical protein HMPREF0602_1556 | |||
| 271 | 203 aa hypothetical protein | |||
| 272 | M | M.Nbe328ORFGP (100% identity) | M.Nbe329ORFGP | |
| 278 | V | V.Nbe328ORFGP (100% identity) | V.Nbe329ORFGP | |
| 281 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 350 | 100 aa hypothetical protein | |||
| 351 | R | Nbe328ORFMP (100% identity) | Nbe329ORFLP | |
| 352 | M | M.Nbe328ORFMP (100% identity) | M.Nbe329ORFLP | |
| 353 | NADH:ubiquinone oxidoreductase subunit 5 /Multisubunit Na+/H+ antiporter, MnhA subunit, partial | |||
| 824 | CopG family transcriptional regulator | |||
| 825 | M | M.Nbe328ORFKP (100% identity) | M.Nbe329ORFJP | |
| 826 | 329 aa hypothetical protein | |||
| 1900 | 173 aa hypothetical protein | |||
| 1902 | M | M.Nbe328ORFIP (100% identity) | M.Nbe329ORFHP | |
| 1905 | DUF541 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 292 | tRNA 2-thiocytidine synthetase TtcA | |||
| 294 | R | Nbe328ORFHP (100% identity) | Nbe329ORFIP | |
| 299 | M | M.Nbe328ORFHP (95% identity) | M.Nbe329ORFIP | |
| 302 | 158 aa hypothetical protein | |||
| 817 | tRNA pseudouridine synthase B | |||
| ??? | M | M.Nbe328ORFLP (100% identity) | M.Nbe329ORFKP | |
| 825 | R | Nbe328ORFLP (100% identity) | Nbe329ORFKP | |
| 829 | alpha-hydroxy-acid oxidizing protein | |||