Neisseria elongata C2011003085 |
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Putative Neisseria elongata C2011003085 RM systems
Ref: Nichols,M. et al. unpublished
REBASE ref # 27132
Contig set: 2,320,322 bp
GenBank #: POXJ00000000 (NZ_POXJ00000000)
REBASE acronym: Nel3085
Org_num: 30358
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 160 | 103 aa hypothetical protein | |||
| 161 | R | 629 aa conserved hypothetical protein | Nel3085ORFGP | |
| 163 | 182 aa hypothetical protein | |||
| 164 | 240 aa hypothetical protein | |||
| 165 | 59 aa hypothetical protein | |||
| 166 | 63 aa hypothetical protein | |||
| 167 | insertion element IS1106 transposase domain protein | |||
| 168 | 69 aa hypothetical protein | |||
| 169 | 62 aa hypothetical protein | |||
| 170 | 86 aa hypothetical protein | |||
| 171 | 61 aa hypothetical protein | |||
| 174 | M | SAM-dependent DNA methyltransferase | M.Nel3085ORFGP | |
| 177 | 235 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.Nel18262ORFCP (99% identity) | M.Nel3085ORFCP | |
| 80 | GTP-binding protein Obg/CgtA | |||
| 85 | M | M.Nsu5313ORF6535P (99% identity) | M1.Nel3085ORFJP | |
| 86 | M | M.Nsu5313ORF6530P (98% identity) | M2.Nel3085ORFJP | |
| 87 | 210 aa hypothetical protein | |||
| 72 | 92 aa hypothetical protein NEIELOOT_00467 | |||
| 73 | RM | Nel10207ORFBP (82% identity) | Nel3085ORFAP | |
| 84 | ABC superfamily ATP binding cassette transporter, ABC protein | |||
| 89 | 146 aa hypothetical protein | |||
| 92 | RM | Hpa12888ORF1805P (88% identity) | Nel3085ORFLP | |
| 100 | 2-hydroxyacid dehydrogenase | |||
| 108 | ATP-dependent RNA helicase HrpA | |||
| 115 | R | Nmu10774ORF1492P (98% identity) | Nel3085ORFIP | |
| 122 | M | M.Nsu1664ORFJP (96% identity) | M.Nel3085ORFIP | |
| 124 | 63 aa hypothetical protein | |||
| 180 | 59 aa hypothetical protein | |||
| 181 | M | M.Csp003ORF8380P (75% identity) | M.Nel3085ORFBP | |
| 182 | R | Bsp15426ORF7000P (66% identity) | Nel3085ORFBP | |
| 183 | DNA-3-methyladenine glycosylase 2 family protein | |||
| 246 | 104 aa hypothetical protein | |||
| 248 | M | M.Nel10062ORFFP (98% identity) | M.Nel3085ORFHP | |
| 250 | R | Nel15910ORFIP (94% identity) | Nel3085ORFHP | |
| 252 | V | V.Nel15910ORFIP (93% identity) | V.Nel3085ORFHP | |
| 255 | intein splicing region | |||
| 354 | 114 aa hypothetical protein HMPREF9418_1662 | |||
| 356 | M | M.Nsu18660ORFBP (100% identity) | M.Nel3085ORFFP | |
| 357 | 430 aa hypothetical protein | |||
| 435 | 150 aa hypothetical protein | |||
| ??? | M | M.Nel15910ORFHP (65% identity) | M.Nel3085ORFDP | |
| 453 | 91 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 53 | lipid-A-disaccharide synthase | |||
| 58 | R | Nsp06ORF10375P (95% identity) | Nel3085ORFKP | |
| 63 | M | M.Nel10062ORFDP (95% identity) | M.Nel3085ORFKP | |
| 69 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | |||