Putative Neisseria polysaccharea C2013011231 RM systems
Ref: Nichols,M. et al. unpublished
REBASE ref # 27132
Contig set: 2,124,254 bp
GenBank #: POXT00000000 (NZ_POXT00000000)
REBASE acronym: Npo11231
Org_num: 30348
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5 | ATP-binding cassette domain-containing protein | |||
7 | R | Nsu073ORF2680P (94% identity) | Npo11231ORFAP | |
11 | S | S.Nel10062ORFBP (67% identity) | S.Npo11231ORFAP | |
13 | M | M.Nel10207ORFDP (96% identity) | M.Npo11231ORFAP | |
14 | 206 aa hypothetical protein NGEG_04810 | |||
229 | ATP-dependent Clp protease ATP-binding subunit ClpA | |||
238 | R | NmeAORF1038P (97% identity) | Npo11231ORFEP | |
244 | S | S.Nme99ORF1243P (69% identity) | S.Npo11231ORFEP | |
248 | 67 aa hypothetical protein | |||
250 | M | M.Nme24705ORF9505P (98% identity) | M.Npo11231ORFEP | |
253 | 253 aa hypothetical protein NEISUBOT_05279 | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1 | 59 aa hypothetical protein | |||
2 | M | M.Mov11969ORF1011P (65% identity) | M.Npo11231ORFBP | |
3 | R | Mov11969ORF1011P (68% identity) | Npo11231ORFBP | |
5 | DUF3418 domain-containing protein | |||
35 | peptidase S24-like protein | |||
37 | M | M.Ngo14ORF943P (74% identity) | M.Npo11231ORFJP | |
40 | 68 aa hypothetical protein | |||
43 | 71 aa hypothetical protein | |||
44 | RM | Nci28592ORFCP (75% identity) | Npo11231ORFGP | |
52 | 72 aa hypothetical protein | |||
116 | ABC transporter permease | |||
119 | RM | class I SAM-dependent DNA methyltransferase | CATCAC | Npo11231ORFCP |
128 | 285 aa hypothetical protein | |||
135 | Uncharacterised protein | |||
137 | M | M.Npo18661ORFCP (99% identity) | M.Npo11231ORFHP | |
140 | R | Npo18661ORFCP (96% identity) | Npo11231ORFHP | |
142 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | |||
384 | CRISPR-associated protein Cas5, Dvulg subtype | |||
387 | R | Sens24219ORF5510P (54% identity) | Npo11231ORFIP | |
388 | M | M.SenCASA2ORF8455P (40% identity) | M.Npo11231ORFIP | |
389 | CRISPR-associated helicase Cas3' | |||
608 | phenylalanine--tRNA ligase subunit beta | |||
613 | R | NmeST1117ORF1P (99% identity) | Npo11231ORFFP | |
615 | M | M.NmeST1117ORF1P (100% identity) | M.Npo11231ORFFP | |
616 | 313 aa hypothetical protein XAP6984_1330071 | |||
680 | 60 aa hypothetical protein MCC93_08660 | |||
681 | C | C.Nsu20198ORFCP (92% identity) | C.Npo11231ORFLP | |
682 | helix-turn-helix domain-containing protein | |||
683 | 63 aa hypothetical protein | |||
684 | 81 aa hypothetical protein | |||
686 | M | M2.Npe3ORF7785P (99% identity) | M1.Npo11231ORFLP | |
687 | M | M1.Nsu1510ORFGP (98% identity) | M2.Npo11231ORFLP | |
688 | leucine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
45 | tRNA 2-thiocytidine synthetase TtcA | |||
46 | R | Nla10616ORF809P (98% identity) | Npo11231ORFDP | |
52 | M | M.Nme8554ORF288P (57% identity) | M.Npo11231ORFDP | |
55 | 68 aa hypothetical protein | |||
88 | Penicillin-binding protein | |||
90 | R | Nla10616ORF532P (97% identity) | Npo11231ORFKP | |
??? | M | M.Nmu2444ORFCP (67% identity) | M.Npo11231ORFKP | |
104 | 84 aa hypothetical protein |