Escherichia coli Es_ST410_NW1_NDM_09_2017 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Es_ST410_NW1_NDM_09_2017 RM systems
Ref: Turton,J.F. and Turton,J.A. unpublished
REBASE ref # 27272
| Sequence length: | GenBank #: | |
| Chromosome: | 4,800,614 bp | CP031231 |
| plasmid pEsST410_NW_2: | 54,776 bp | CP031232 |
| plasmid pEsST410_NW_3: | 98,308 bp | CP031233 |
REBASE acronym: EcoST410
Org_num: 30261
All begin DVH14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15595 | DUF1738 domain-containing protein | |||
| 15600 | M | M.Kpn80028ORFBP (100% identity) | M.EcoST410ORF15600P | |
| 15605 | 307 aa hypothetical protein | |||
| 15610 | 0 aa hypothetical protein | |||
| 15615 | S | S.Kpn80028ORFBP (100% identity) | S.EcoST410ORF15600P | |
| 15620 | adhesin | |||
| 19475 | IS3 family transposase | |||
| 19480 | M | M.SenS688ORF13495P (100% identity) | M.EcoST410ORF19480P | |
| 19485 | S | S.Sen12509ORF5865P (57% identity) | S1.EcoST410ORF19480P | |
| 19490 | IS1 family transposase | |||
| 19495 | IS1 family transposase | |||
| 19500 | S | S.SenS688ORF13495P (42% identity) | S2.EcoST410ORF19480P | |
| 19505 | R | Sen12509ORF5865P (100% identity) | EcoST410ORF19480P | |
| 19510 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9185 | TraR/DksA family transcriptional regulator | |||
| 9190 | M | M.Sen30575ORF16925P (100% identity) | M.EcoST410ORF9190P | |
| 9195 | replication endonuclease | |||
| 14835 | DUF1317 family protein | |||
| ??? | M | M.KpnI610ORF6115P (94% identity) | M.EcoST410ORF14840P | |
| 14845 | 74 aa hypothetical protein | |||
| 15305 | drug/metabolite exporter YedA | |||
| 15310 | V | V.EcosEC7DcmP (100% identity) | V.EcoST410DcmP | |
| 15315 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoST410DcmP |
| 15320 | phosphohydrolase | |||
| 18075 | DUF1317 family protein | |||
| 18080 | M | M.KpnH93ORFAP (100% identity) | M.EcoST410ORF18080P | |
| 18085 | 0 aa hypothetical protein | |||
| 22950 | site-specific integrase | |||
| 22955 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoST410ORF22955P |
| 22960 | DUF2556 domain-containing protein | |||
| 23605 | ribulose-phosphate 3-epimerase | |||
| 23610 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoST410DamP |
| 23615 | protein DamX | |||
| plasmid pEsST410_NW_2 | ||||
| 24975 | 63 aa hypothetical protein | |||
| 24990 | M | M.EcoUKDORF25705P (100% identity) | M.EcoST410ORF24990P | |
| 24995 | recombination-associated protein RdgC | |||
| plasmid pEsST410_NW_3 | ||||
| 25355 | 73 aa hypothetical protein | |||
| 25360 | M | M.EcoYPE12ORF15P (94% identity) | M.EcoST410ORF25360P | |
| 25365 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10980 | recombinase family protein | |||
| 10985 | R | EcoteDMcrBP (100% identity) | EcoST410McrBP | |
| 10990 | R | EcosEC27McrCP (100% identity) | EcoST410McrCP | |
| 10995 | isocitrate dehydrogenase | |||