Escherichia coli DV112i |
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Putative Escherichia coli DV112i RM systems
Ref: Browne,A.S. unpublished
REBASE ref # 27025
Contig set: 5,447,570 bp
GenBank #: PELG00000000 (NZ_PELG00000000)
REBASE acronym: EcoDV112
Org_num: 30175
All begin CTZ33_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | 65 aa hypothetical protein ECDEC9E_3556 | |||
| 29575 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.EcoDV112ORF29575P |
| 29580 | LexA family transcriptional regulator | |||
| 27970 | recombination protein NinB | |||
| 27975 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoDV112ORF27975P |
| 27980 | NinE family protein | |||
| 28705 | RusA family crossover junction | |||
| 28710 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.EcoDV112ORF28710P |
| 22105 | 73 aa hypothetical protein | |||
| 22110 | M | M.Sen527ORF25750P (100% identity) | M.EcoDV112ORF22110P | |
| 22115 | 101 aa hypothetical protein | |||
| 2490 | DUF2556 domain-containing protein | |||
| 2495 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoDV112ORF2495P |
| 2500 | Fis family transcriptional regulator | |||
| 19965 | phosphohydrolase | |||
| 19970 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.EcoDV112DcmP |
| 19975 | V | V.SsoSE61DcmP (100% identity) | V.EcoDV112DcmP | |
| 19980 | EamA family transporter | |||
| 15100 | 309 aa hypothetical protein | |||
| 15105 | M | M.EcoSJ7ORF2490P (99% identity) | M.EcoDV112ORF15105P | |
| 15110 | VRR-NUC domain-containing protein | |||
| 22875 | 70 aa hypothetical protein | |||
| ??? | M | M.EcoH25ORF3061P (100% identity) | M.EcoDV112ORFBP | |
| 22890 | Eag protein | |||
| 19520 | TrmB family transcriptional regulator | |||
| 19525 | M | M.EcosA30ORF12130P (99% identity) | M.EcoDV112ORF19525P | |
| 19545 | sialate O-acetylesterase | |||
| 1635 | ribulose-phosphate 3-epimerase | |||
| 1640 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDV112DamP |
| 1645 | cell division protein DamX | |||
| 13800 | replication endonuclease | |||
| 13805 | M | M.EcoSO40ORF23900P (100% identity) | M.EcoDV112ORF13805P | |
| 13810 | 129 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27125 | R | Sen7230ORF24715P (77% identity) | EcoDV112ORF27130P | |
| 27130 | M | M.SenL0047ORF24180P (100% identity) | M.EcoDV112ORF27130P | |
| 27135 | Rop family plasmid primer RNA-binding protein | |||