Dickeya dianthicola DE440 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Dickeya dianthicola DE440 RM systems
Ref: Cai,W. et al. unpublished
REBASE ref # 27005
Contig set: 4,867,525 bp
GenBank #: PJJB00000000 (NZ_PJJB00000000)
REBASE acronym: Ddi440
Org_num: 30160
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9 | M48 family peptidase | |||
| 12 | R | DdiME23ORF921P (100% identity) | Ddi440ORFDP | |
| 16 | DUF4433 domain-containing protein | |||
| 17 | 113 aa hypothetical protein | |||
| 18 | DUF4433 domain-containing protein | |||
| 19 | 82 aa hypothetical protein | |||
| 20 | DUF4433 domain-containing protein | |||
| 21 | 69 aa hypothetical protein | |||
| 22 | S | S.DdiME23ORF921P (100% identity) | S.Ddi440ORFDP | |
| 24 | M | M.DdiPA24ORF4615P (100% identity) | M.Ddi440ORFDP | |
| 28 | Uncharacterised protein | |||
| 862 | 99 aa hypothetical protein | |||
| 863 | R | DdiPA24ORF3290P (100% identity) | Ddi440ORFHP | |
| 867 | M | M.DdiPA24ORF3290P (100% identity) | M.Ddi440ORFHP | |
| 871 | S | S1.DdiPA24ORF3290P (100% identity) | S.Ddi440ORFHP | |
| 874 | type I restriction-modification system, subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3 | 60 aa hypothetical protein | |||
| 4 | M | M.DdiPA24ORF7340P (100% identity) | M.Ddi440ORFEP | |
| 5 | 857 aa hypothetical protein, partial | |||
| 106 | DNA-invertase | |||
| 109 | M | M.DdiPA24ORF15945P (100% identity) | M.Ddi440ORFCP | |
| 110 | R | DdiME30ORF15960P (100% identity) | Ddi440ORFCP | |
| 111 | 132 aa hypothetical protein DDI_2943 | |||
| 187 | 89 aa hypothetical protein | |||
| 188 | R | DdiPA24ORF7785P (100% identity) | Ddi440ORFAP | |
| 189 | M | M.DdiPA24ORF7785P (100% identity) | M.Ddi440ORFAP | |
| 190 | 66 aa hypothetical protein | |||
| 188 | SPOR domain-containing protein | |||
| 191 | M | M.Dsp2401ORFJP (100% identity) | GATC | M.Ddi440ORFBP |
| 193 | 97 aa hypothetical protein | |||
| 289 | 67 aa hypothetical protein | |||
| 293 | M | M.DdiPA24ORF16205P (100% identity) | M.Ddi440ORFGP | |
| 297 | 222 aa hypothetical protein | |||
| 416 | 68 aa hypothetical protein | |||
| 417 | M | M.DdiPA24ORF3960P (100% identity) | M.Ddi440ORFIP | |
| 419 | R | DdiPA24ORF3960P (100% identity) | Ddi440ORFIP | |
| 421 | 133 aa hypothetical protein | |||
| 427 | DNA cytosine methyltransferase | |||
| 430 | M | M.DdiPA24ORF3940P (100% identity) | M.Ddi440ORFKP | |
| 434 | 76 aa hypothetical protein | |||
| 594 | Transporter, LysE family | |||
| 596 | V | V.DdiPA24ORF2190P (100% identity) | V.Ddi440ORFFP | |
| 597 | M | M.DdiME30ORF2190P (100% identity) | M.Ddi440ORFFP | |
| 598 | R | DdiPA24ORF2190P (100% identity) | Ddi440ORFFP | |
| 599 | 159 aa hypothetical protein | |||