Paracoccus denitrificans ISTOD1 |
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Putative Paracoccus denitrificans ISTOD1 RM systems
Ref: Thakur,I.S. and Medhi,K. unpublished
REBASE ref # 26984
Contig set: 4,901,510 bp
GenBank #: PPGA00000000 (NZ_PPGA00000000)
REBASE acronym: PdeOD1
Org_num: 30138
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 537 | 304 aa hypothetical protein | |||
| 544 | M | M.Pfe100066ORF3740P (77% identity) | M.PdeOD1ORFCP | |
| 549 | S | S.MspALG8ORF9110P (53% identity) | S.PdeOD1ORFCP | |
| 554 | 110 aa hypothetical protein | |||
| 555 | DUF2188 domain-containing protein | |||
| 556 | 59 aa hypothetical protein | |||
| 557 | 144 aa hypothetical protein | |||
| 558 | haloacid dehalogenase-like hydrolase | |||
| 559 | 106 aa hypothetical protein | |||
| 562 | R | Pfe100066ORF3740P (96% identity) | PdeOD1ORFCP | |
| 568 | 59 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | M | M.PdeDYTN1ORF16175P (75% identity) | M.PdeOD1ORFDP | |
| 3 | 142 aa hypothetical protein | |||
| 53 | 120 aa hypothetical protein | |||
| 55 | M | M.PspMAORF980P (60% identity) | M.PdeOD1ORFEP | |
| 67 | 211 aa hypothetical protein BGO05_23125 | |||
| 82 | 70 aa hypothetical protein | |||
| 83 | RM | PspOHORF21010P (97% identity) | PdeOD1ORFJP | |
| 87 | 168 aa hypothetical protein | |||
| 101 | 64 aa hypothetical protein | |||
| 105 | M | M.PspD09ORF15060P (84% identity) | M.PdeOD1ORFKP | |
| 107 | 122 aa hypothetical protein | |||
| 96 | M | M.Pye252ORF10735P (79% identity) | M.PdeOD1ORFHP | |
| 106 | replication protein A | |||
| 133 | 153 aa hypothetical protein | |||
| 159 | M | M.PmuRSP02ORF8955P (88% identity) | M.PdeOD1ORFIP | |
| 276 | 356 aa conserved hypothetical protein | |||
| 281 | M | M.PdeR1ORF2250P (100% identity) | M.PdeOD1ORFBP | |
| 284 | ribonuclease HII | |||
| 400 | 554 aa hypothetical protein ROA7023_04641 | |||
| 406 | R | BspBR11ORFGP (51% identity) | PdeOD1ORFGP | |
| 408 | M | M.PfrNMC25ORF6725P (50% identity) | M.PdeOD1ORFGP | |
| 411 | 405 aa hypothetical protein | |||
| 471 | 81 aa hypothetical protein | |||
| 473 | M | M.Rsp43702ORF6790P (84% identity) | M.PdeOD1ORFFP | |
| 482 | 96 aa hypothetical protein | |||
| 502 | 372 aa hypothetical protein | |||
| 508 | M | M.PdeR1ORF9295P (84% identity) | M.PdeOD1ORFAP | |
| 513 | 120 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | 59 aa hypothetical protein | |||
| 2 | R | Msp401McrCP (81% identity) | PdeOD1McrCP | |
| 7 | R | RspA2McrBP (83% identity) | PdeOD1McrBP | |
| 18 | 233 aa hypothetical protein | |||