Shigella dysenteriae ATCC 12038 |
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Putative Shigella dysenteriae ATCC 12038 RM systems
Ref: Kim,J.Y. et al. unpublished
REBASE ref # 27021
GenBank #: PSSQ00000000
REBASE acronym: Sdy12038
Org_num: 30134
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4605 | 76 aa hypothetical protein | |||
| 4606 | R | Sdy9753IP (100% identity) | GGANNNNNNCTTT | Sdy12038IP |
| 4611 | M | M.Sso30807I (100% identity) | GGANNNNNNCTTT | M.Sdy12038I |
| 4613 | S | S.Sso30807I (100% identity) | GGANNNNNNCTTT | S.Sdy12038I |
| 4614 | 144 aa hypothetical protein ECDEC13E_3461 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 651 | 66 aa hypothetical protein | |||
| 652 | M | M.Sso30807ORF15405P (100% identity) | A | M.Sdy12038ORFAP |
| 654 | DNA methylase | |||
| 1958 | phage tail tape measure protein | |||
| ??? | M | M.Sso30807ORF12365P (100% identity) | M.Sdy12038ORFHP | |
| 1964 | IS3 family transposase | |||
| 3590 | 108 aa hypothetical protein BXT95_14770 | |||
| 3593 | M | M.Sdy9753ORFEP (100% identity) | GATC | M.Sdy12038ORFBP |
| 3596 | unnamed protein product | |||
| 7446 | cell division protein DamX | |||
| 7449 | M | M.Sso30807DamP (100% identity) | GATC | M.Sdy12038DamP |
| 7451 | Tryptophan--tRNA ligase | |||
| 7746 | 59 aa hypothetical protein SFxv_3614 | |||
| 7747 | M | yhdJ | M.Sdy12038ORFDP | |
| 7749 | tRNA-dihydrouridine synthase B | |||
| 9851 | 73 aa hypothetical protein | |||
| 9852 | M | M.EcoTCM3e1ORF6790P (99% identity) | M.Sdy12038ORFEP | |
| 9855 | 84 aa hypothetical protein | |||
| 11941 | HD domain protein | |||
| 11942 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Sdy12038DcmP |
| 11944 | V | V.Sdy49550DcmP (100% identity) | V.Sdy12038DcmP | |
| 11947 | transmembrane subunit | |||
| 12226 | unnamed protein product | |||
| 12228 | M | M.Sdy49550ORFGP (100% identity) | GATC | M.Sdy12038ORFGP |
| 12232 | 102 aa hypothetical protein CSW72_22935 | |||
| 12240 | 104 aa hypothetical protein | |||
| 12241 | M | M.Sdy9753ORFAP (100% identity) | A | M.Sdy12038ORFFP |
| 12243 | 68 aa hypothetical protein | |||