Escherichia coli E2855 |
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Putative Escherichia coli E2855 RM systems
Ref: Kusumoto,M. et al. unpublished
REBASE ref # 27243
| Sequence length: | GenBank #: | |
| Chromosome: | 5,470,440 bp | AP018796 |
| plasmid pE2855-1: | 125,200 bp | AP018797 |
| plasmid pE2855-2: | 94,446 bp | AP018798 |
| plasmid pE2855-3: | 92,697 bp | AP018799 |
| plasmid pE2855-5: | 71,289 bp | AP018801 |
REBASE acronym: EcoE2855
Org_num: 30074
All begin E2855_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 870 | L,D-transpeptidase linking Lpp to murein | |||
| ??? | R | Eco3716ORFEP (100% identity) | GGTNACC | EcoE2855ORF872P |
| 872 | M | M.Eco3716ORFEP (100% identity) | GGTNACC | M.EcoE2855ORF872P |
| 873 | site-specific recombinase | |||
| 1119 | 70 aa hypothetical protein | |||
| 1120 | M | M.Sso1099ORF735P (100% identity) | GATC | M.EcoE2855ORF1120P |
| 1121 | regulatory protein | |||
| 1146 | 156 aa hypothetical protein | |||
| 1147 | R | EcoF690ORF30660P (100% identity) | CTGCAG | EcoE2855ORF1148P |
| 1148 | M | M.EcoE2863ORF2986P (100% identity) | CTGCAG | M.EcoE2855ORF1148P |
| 1149 | phage repressor protein CI | |||
| 1415 | 65 aa hypothetical protein | |||
| 1416 | M | M.EcoE2863ORF1308P (100% identity) | M.EcoE2855ORF1416P | |
| 1419 | 29 aa hypothetical protein | |||
| 1584 | 65 aa hypothetical protein | |||
| 1585 | M | M.EcoE2863ORF1482P (100% identity) | M.EcoE2855ORF1585P | |
| 1586 | 648 aa hypothetical protein | |||
| 1739 | 53 aa hypothetical protein | |||
| 1740 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoE2855ORF1740P | |
| 1741 | 329 aa hypothetical protein | |||
| 2497 | amino acid exporter for phenylalanine | |||
| 2498 | V | V.SsoSE61DcmP (100% identity) | V.EcoE2855DcmP | |
| 2499 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoE2855DcmP |
| 2500 | HD superfamily phosphohydrolase | |||
| 3012 | 645 aa hypothetical protein | |||
| 3016 | S | S.EcoSO40ORF8270P (100% identity) | S.EcoE2855ORF3017P | |
| ??? | RM | Eco3C3250ORFDP (90% identity) | EcoE2855ORF3017P | |
| 3018 | regulatory protein MokC for HokC | |||
| 3084 | phage repressor protein CI | |||
| 3085 | M | M.EcoG5295ORF7835P (100% identity) | CTGCAG | M.EcoE2855ORF3085P |
| 3086 | R | Eco3C3250ORFCP (100% identity) | CTGCAG | EcoE2855ORF3085P |
| 3087 | 214 aa hypothetical protein | |||
| 3347 | translation inhibitor protein RaiA | |||
| 3348 | M | M.Ecos154ORF1441P (99% identity) | M.EcoE2855ORF3348P | |
| 3349 | 98 aa hypothetical protein | |||
| 3461 | phage antirepressor protein | |||
| 3462 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoE2855ORF3462P |
| 3463 | recombination protein | |||
| 4217 | global DNA-binding transcriptional dual | |||
| 4218 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE2855ORF4218P |
| 4219 | 59 aa hypothetical protein | |||
| 4332 | D-ribulose-5-phosphate 3-epimerase | |||
| 4333 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE2855DamP |
| 4334 | cell division protein DamX | |||
| 5081 | 138 aa hypothetical protein | |||
| 5082 | M | M.EcoLSU61ORF26180P (100% identity) | M.EcoE2855ORF5082P | |
| 5083 | 116 aa hypothetical protein | |||
| 5371 | alkaline phosphatase | |||
| 5372 | RM | EcoFP2ORF70P (100% identity) | CRARCAG | EcoE2855ORF5372P |
| 5373 | ATPase-like protein | |||
| plasmid pE2855-1 | ||||
| 5531 | 308 aa hypothetical protein | |||
| 5532 | M | M.EcoV04ORF25795P (100% identity) | SAY | M.EcoE2855ORF5532P |
| 5533 | 73 aa hypothetical protein | |||
| plasmid pE2855-2 | ||||
| 5683 | recombination-associated protein rdgC | |||
| 5684 | M | M.Eco3492AORFFP (99% identity) | M.EcoE2855ORF5684P | |
| 5688 | 42 aa hypothetical protein | |||
| plasmid pE2855-3 | ||||
| 5780 | plasmid partition protein | |||
| 5781 | M | M.EcoK1516ORFIP (100% identity) | M.EcoE2855ORF5781P | |
| 5782 | 73 aa hypothetical protein | |||
| plasmid pE2855-5 | ||||
| 5960 | 308 aa hypothetical protein | |||
| 5961 | M | DNA methylase | M.EcoE2855ORF5961P | |
| 5962 | 57 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pE2855-2 | ||||
| 5628 | 213 aa hypothetical protein | |||
| 5629 | R | Eco3252ORFDP (100% identity) | EcoE2855ORF5630P | |
| 5630 | M | M.Eco3252ORFDP (100% identity) | M.EcoE2855ORF5630P | |
| 5631 | 82 aa hypothetical protein | |||