Photorhabdus laumondii subsp. laumondii DJC |
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Putative Photorhabdus laumondii subsp. laumondii DJC RM systems
Ref: Zamora-Lagos,M.-A. et al. unpublished
REBASE ref # 27248
Complete sequence: 5,536,539 bp
GenBank #: CP024900
REBASE acronym: PlaDJC
Org_num: 30082
All begin PluDJC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21360 | integrase | |||
| 21365 | M | M.PluHP88ORF14955P (77% identity) | M.PlaDJCORF21365AP | |
| 21370 | IS630 family transposase ISPlu19 | |||
| ??? | M | type I restriction-modification system subunit M | M.PlaDJCORF21365BP | |
| 21380 | S | S.Plu124ORF2730P (53% identity) | S.PlaDJCORF21365AP | |
| 21385 | IS5 family transposase | |||
| 21390 | S | restriction endonuclease subunit S | S.PlaDJCORF21365BP | |
| 21395 | anticodon nuclease | |||
| 21400 | R | Plu2NORF21415P (100% identity) | PlaDJCORF21365P | |
| 21405 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 445 | ribulose-phosphate 3-epimerase | |||
| 450 | M | M.PluTDamP (100% identity) | M.PlaDJCDamP | |
| 455 | SPOR domain-containing protein | |||
| 1245 | 115 aa hypothetical protein | |||
| 1250 | RM | PluTORF233P (100% identity) | PlaDJCORF1250P | |
| 1255 | ISL3 family transposase | |||
| 2990 | ATP-dependent endonuclease | |||
| 2995 | R | Plu2NORF6655P (100% identity) | GGCGCC | PlaDJCORF3000P |
| 3000 | M | M.PluTI (100% identity) | GGCGCC | M.PlaDJCORF3000P |
| 3005 | IS982 family transposase | |||
| 10040 | 94 aa hypothetical protein | |||
| 10045 | R | PluTIIIP (100% identity) | AGGCCT | PlaDJCORF10050P |
| 10050 | M | M.PluTIII (100% identity) | AGGCCT | M.PlaDJCORF10050P |
| 10055 | flagellar type III secretion system protein | |||
| 10615 | 74 aa hypothetical protein | |||
| 10620 | M | M.Mmo133ORF12575P (56% identity) | M.PlaDJCORF10620P | |
| 10625 | DNA adenine methylase | |||
| 10620 | DNA cytosine methyltransferase | |||
| 10625 | M | M.Pte15199ORF7470P (46% identity) | M.PlaDJCORF10625P | |
| 10630 | 314 aa hypothetical protein | |||
| 14210 | abortive infection family protein | |||
| 14215 | R | PluTVP (100% identity) | PlaDJCORF14220P | |
| 14220 | M | M.PluTV (100% identity) | M.PlaDJCORF14220P | |
| 14225 | 104 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24070 | replication endonuclease | |||
| 24075 | M | M.Pte15199ORF7470P (93% identity) | M.PlaDJCORF24075P | |
| 24080 | 73 aa hypothetical protein | |||