Erwinia tracheiphila MDcuke |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Erwinia tracheiphila MDcuke RM systems
Ref: Shapiro,L. unpublished
REBASE ref # 28240
Complete sequence: 4,891,733 bp
GenBank #: CP013970
REBASE acronym: EtrMD
Org_num: 29943
All begin AV903_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2065 | pyocin activator protein PrtN | |||
| 2070 | M | M.EtrSCR3ORF16705P (100% identity) | M.EtrMDORF2070P | |
| 2075 | 3-5 exoribonuclease | |||
| 3120 | 250 aa hypothetical protein | |||
| 3125 | M | M.EtrSCR3ORF15610P (100% identity) | M.EtrMDORF3125P | |
| 3130 | DNA cytosine methyltransferase | |||
| 3125 | Dam family site-specific | |||
| 3130 | M | M.EtrSCR3ORF15605P (100% identity) | M.EtrMDORF3130P | |
| 3135 | replication endonuclease | |||
| 4335 | DNA replication protein | |||
| 4340 | M | M.EtrSCR3ORF14455P (100% identity) | M.EtrMDORF4340P | |
| 4345 | DNA cytosine methyltransferase | |||
| 4340 | phage N-6-adenine-methyltransferase | |||
| 4345 | M | M.EtrSCR3ORF14450P (100% identity) | M.EtrMDORF4345P | |
| 4350 | DUF968 domain-containing protein | |||
| 4360 | TrmB family transcriptional regulator | |||
| 4365 | M | M.EtrSCR3ORF14430P (100% identity) | M.EtrMDORF4365P | |
| 4370 | holin | |||
| 4570 | recombination protein NinB | |||
| 4575 | M | M.EtrSCR3ORF14210P (100% identity) | M.EtrMDORF4575P | |
| 4580 | RusA family crossover junction | |||
| 4650 | 218 aa hypothetical protein | |||
| 4655 | M | M.EtrBGHORF9925P (100% identity) | M.EtrMDORF4655P | |
| 4660 | V | V.EtrSCR3ORF14135P (100% identity) | V.EtrMDORF4655P | |
| 4665 | 92 aa hypothetical protein | |||
| 7055 | sugar O-acetyltransferase | |||
| 7060 | M | M.EtrMDCORF12175P (100% identity) | M.EtrMDORF7060P | |
| 7065 | 78 aa hypothetical protein | |||
| 8605 | 74 aa hypothetical protein | |||
| 8610 | M | M.EtrSCR3ORF6940P (100% identity) | M.EtrMDORF8610P | |
| 8615 | 240 aa hypothetical protein | |||
| 11590 | 88 aa hypothetical protein | |||
| 11595 | M | M.EtrSCR3ORF7665P (100% identity) | M.EtrMDORF11595P | |
| 11600 | DUF2441 domain-containing protein | |||
| 12225 | recombination protein NinG | |||
| 12230 | M | M.EtrSCR3ORF7050P (100% identity) | M.EtrMDORF12230P | |
| 12235 | 66 aa hypothetical protein | |||
| 12335 | 74 aa hypothetical protein | |||
| 12340 | M | M.EtrSCR3ORF6940P (100% identity) | M.EtrMDORF12340P | |
| 12345 | 240 aa hypothetical protein | |||
| 12365 | 74 aa hypothetical protein | |||
| 12370 | M | M.EtrSCR3ORF6910P (100% identity) | M.EtrMDORF12370P | |
| 12375 | excisionase | |||
| 17575 | 91 aa hypothetical protein | |||
| 17580 | M | M.EtrSCR3ORF1750P (100% identity) | M.EtrMDORF17580P | |
| 17585 | 77 aa hypothetical protein | |||
| 17765 | type II toxin-antitoxin system Phd/YefM family | |||
| 17770 | M | M.EtrSCR3ORF1560P (100% identity) | M.EtrMDORF17770P | |
| 17775 | type II toxin-antitoxin system HicB family | |||
| 17805 | 68 aa hypothetical protein | |||
| 17810 | M | M.EtrMDCORF1535P (100% identity) | M.EtrMDORF17810P | |
| 17815 | 3-5 exoribonuclease | |||
| 19030 | biofilm formation regulator HmsP | |||
| 19035 | M | M.EtrSCR3ORF320P (100% identity) | M.EtrMDORF19035P | |
| 19040 | R | EtrMDCORF325P (100% identity) | EtrMDORF19035P | |
| 19045 | DUF2235 domain-containing protein | |||
| 20050 | 68 aa hypothetical protein | |||
| 20055 | R | EtrSCR3ORF24570P (100% identity) | EtrMDORF20060P | |
| 20060 | M | M.EtrSCR3ORF24570P (100% identity) | M.EtrMDORF20060P | |
| 20065 | IS91 family transposase | |||
| 21755 | SPOR domain-containing protein | |||
| 21760 | M | M.EtrSCR3DamP (100% identity) | M.EtrMDDamP | |
| 21765 | ribulose-phosphate 3-epimerase | |||
| 22110 | IS481 family transposase | |||
| 22115 | M | M.EtrSCR3ORF22500P (100% identity) | M.EtrMDORF22115P | |
| 22120 | 78 aa hypothetical protein | |||
| 23905 | 139 aa hypothetical protein | |||
| 23910 | M | M.EtrMDCORF21235P (50% identity) | M.EtrMDORF23910P | |
| 23915 | 266 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4610 | transposase | |||
| 4615 | R | EtrMDCORF14605P (100% identity) | EtrMDORF4620P | |
| 4620 | M | M.EtrSCR3ORF14170P (100% identity) | M.EtrMDORF4620P | |
| 4625 | DUF4102 domain-containing protein | |||