Acidithiobacillus species SH |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Acidithiobacillus species SH RM systems
Ref: Sharmin,S. et al. unpublished
REBASE ref # 26586
Contig set: 2,903,611 bp
GenBank #: MXAV00000000 (NZ_MXAV00000000)
REBASE acronym: AspSH
Org_num: 29904
All begin B1757_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6375 | 504 aa hypothetical protein | |||
| 6380 | R | Tfr970ORF4938P (89% identity) | AspSHORF6380P | |
| 6385 | metal-dependent hydrolase | |||
| 13000 | 83 aa hypothetical protein | |||
| 13005 | M | M.Ppa2944ORF7795P (80% identity) | M.AspSHORF13005P | |
| 13010 | 132 aa hypothetical protein | |||
| 13015 | 99 aa hypothetical protein | |||
| 13020 | 364 aa hypothetical protein | |||
| 13025 | S | S.Par7543ORF178P (43% identity) | S2.AspSHORF13005P | |
| 13030 | 250 aa hypothetical protein | |||
| 13035 | R | UspCCC34ORF18695P (85% identity) | AspSHORF13005P | |
| 13040 | ISL3 family transposase | |||
| 8145 | single-stranded DNA exonuclease | |||
| 8150 | R | Din5ORF1707P (97% identity) | AspSHORF8160P | |
| 8155 | DNA-binding protein | |||
| 8160 | M | M.Din5ORF1707P (87% identity) | M.AspSHORF8160P | |
| 8165 | S | S.Vhaf3ORFCP (41% identity) | S.AspSHORF8160P | |
| 8170 | 99 aa hypothetical protein | |||
| 6340 | dihydroorotase | |||
| 6345 | M | M.DthMLF1ORF775P (89% identity) | M.AspSHORF6345P | |
| 6350 | 86 aa hypothetical protein | |||
| 6355 | S | S.MkoLM6ORF3675P (44% identity) | S.AspSHORF6345P | |
| 6360 | 283 aa hypothetical protein | |||
| 1165 | DUF188 domain-containing protein | |||
| 1170 | R | Lca55ORF5344P (75% identity) | AspSHORF1200P | |
| 1175 | cytoplasmic protein | |||
| 1180 | S | S.MpaNE2ORF10876P (50% identity) | S2.AspSHORF1200P | |
| 1185 | hydroxyacid dehydrogenase | |||
| 1190 | Zeta toxin family protein | |||
| 1195 | 68 aa hypothetical protein | |||
| 1200 | M | M.AspAMDORF1745P (90% identity) | M.AspSHORF1200P | |
| 1205 | VapC toxin family PIN domain ribonuclease | |||
| 9015 | sodium-independent anion transporter | |||
| 9020 | M | M.HspDCM1ORF2735P (87% identity) | M.AspSHORF9020P | |
| 9025 | cell filamentation protein Fic | |||
| 9030 | S | S.SstDN36ORF11945P (67% identity) | S.AspSHORF9020P | |
| 9035 | R | AspJHL3IIIP (87% identity) | AspSHORF9020P | |
| 9045 | methyltransferase type 11 | |||
| 9250 | ATPase | |||
| 9255 | RM | CphBORF1677P (53% identity) | AspSHORF9255P | |
| 9260 | 160 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9270 | RM | GsuAM1ORF17290P (23% identity) | AspSHORF9270P | |
| 9275 | S | S.GprSS5ORF15345P (88% identity) | S.AspSHORF9270P | |
| 9280 | TIGR02687 family protein | |||
| 5275 | glutamine-hydrolyzing GMP synthase | |||
| 5280 | RM | Pae105880ORF2265P (74% identity) | AspSHORF5280P | |
| 5285 | MloB | |||
| 2685 | 93 aa hypothetical protein | |||
| 2690 | M | M.Asp221ORFHP (54% identity) | M.AspSHORF2690P | |
| 2695 | DNA cytosine methyltransferase | |||
| 2690 | 277 aa hypothetical protein | |||
| 2695 | M | M.Pae11210ORF32355P (57% identity) | M.AspSHORF2695P | |
| 2700 | 164 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14420 | ATPase | |||
| 14425 | M | M.CbaCRORF1273P (79% identity) | M.AspSHORF14425P | |
| 14430 | S | S2.Bpr03ORF13150P (66% identity) | S.AspSHORF14425P | |
| 14435 | R | McaTexORFIP (82% identity) | AspSHORF14425P | |
| 14440 | magnesium transporter | |||