Escherichia coli AMSHJX01 |
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Putative Escherichia coli AMSHJX01 RM systems
Ref: Ji,X. unpublished
REBASE ref # 26874
| Sequence length: | GenBank #: | |
| Chromosome: | 5,023,979 bp | CP030939 |
| plasmid pAMSH1: | 257,394 bp | CP030940 |
REBASE acronym: EcoJX01
Org_num: 29856
All begin DTO54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23070 | DUF4942 domain-containing protein | |||
| 23075 | M | M.Ecos4422ORF22930P (100% identity) | M.EcoJX01ORF23075P | |
| 23080 | S | S.Ecos4422ORF22930P (100% identity) | S.EcoJX01ORF23075P | |
| 23085 | R | Ecos4422ORF22930P (100% identity) | EcoJX01ORF23075P | |
| 23090 | DNA primase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJX01DamP |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2430 | DUF2556 domain-containing protein | |||
| 2435 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoJX01ORF2435P |
| 2440 | Fis family transcriptional regulator | |||
| 6665 | DUF1382 family protein | |||
| 6670 | M | M.EcoWP4ORF12630P (98% identity) | M.EcoJX01ORF6670P | |
| 6675 | PerC family transcriptional regulator | |||
| 9160 | recombination protein NinB | |||
| 9165 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoJX01ORF9165P |
| 9170 | NinE family protein | |||
| 9855 | DUF3850 domain-containing protein | |||
| 9860 | M | M.EcoESBL15ORF15815P (100% identity) | GATC | M.EcoJX01ORF9860P |
| 9865 | replication endonuclease | |||
| 16480 | EamA family transporter | |||
| 16485 | V | V.SsoSE61DcmP (100% identity) | V.EcoJX01DcmP | |
| 16490 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoJX01DcmP |
| 16495 | phosphohydrolase | |||
| 17715 | NinE family protein | |||
| 17720 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoJX01ORF17720P |
| 17725 | recombination protein NinB | |||
| plasmid pAMSH1 | ||||
| 26675 | 108 aa hypothetical protein | |||
| 26680 | M | M.YpsF1ORFBP (100% identity) | M.EcoJX01ORF26680P | |
| 26685 | 202 aa hypothetical protein | |||
| 26785 | DNA-binding protein | |||
| 26790 | M | M.YpsF1ORFDP (100% identity) | M.EcoJX01ORF26790P | |
| 26795 | 284 aa hypothetical protein | |||
| 27285 | DUF1173 family protein | |||
| 27290 | M | M.YpsF1ORFCP (100% identity) | M.EcoJX01ORF27290P | |
| 27295 | thermonuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11980 | DNA invertase | |||
| ??? | R | SflLIN6GmrSDP (37% identity) | EcoJX01GmrDP | |
| 11990 | 78 aa hypothetical protein | |||