Clostridioides difficile DSM 27640 |
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Putative Clostridioides difficile DSM 27640 RM systems
Ref: Gross,U. et al. BMC Genomics 19 (1), 1 (2018)
REBASE ref # 26854
Complete sequence: 4,229,629 bp
GenBank #: CP011848
REBASE acronym: Cdi27640
Org_num: 29798
All begin CDIF27640_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3129 | 687 aa hypothetical protein | |||
| 3130 | R | Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | Cdi27640ORF3135P |
| 3131 | 142 aa hypothetical protein | |||
| 3132 | DNA polymerase subunit beta | |||
| 3133 | 102 aa hypothetical protein | |||
| 3134 | S | S.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | S.Cdi27640ORF3135P |
| 3135 | M | M.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | M.Cdi27640ORF3135P |
| 3136 | tagatose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2853 | phospholipase | |||
| 2854 | M | M.Cdo072ORF14340P (100% identity) | CAAAAA | M.Cdi27640ORF2854P |
| 2855 | badm/rrf2 family transcriptional regulator | |||
| 3508 | S-adenosylmethionine synthetase | |||
| 3509 | M | M.Cdi27638ORF3509P (100% identity) | M.Cdi27640ORF3509P | |
| 3510 | site-specific DNA methylase | |||
| 3509 | DNA methylase N-4/N-6 domain-containing protein | |||
| 3510 | M | M.Cdi27638ORF3510P (100% identity) | M.Cdi27640ORF3510P | |
| 3511 | virulence-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2170 | sigma-54-dependent transcriptional regulator | |||
| 2171 | R | Cdo072McrCP (100% identity) | Cdi27640McrCP | |
| 2172 | R | Cdo072McrBP (100% identity) | Cdi27640McrBP | |
| 2173 | cell division protein FtsZ | |||