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Putative Clostridioides difficile DSM 27638 RM systems
Ref: Gross,U. et al. BMC Genomics 19 (1), 1 (2018)
REBASE ref # 26854
Complete sequence: 4,229,698 bp
GenBank #: CP011846
REBASE acronym: Cdi27638
Org_num: 29799
All begin CDIF27638_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3129 | 687 aa hypothetical protein | |||
3130 | R | Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | Cdi27638ORF3135P |
3131 | 142 aa hypothetical protein | |||
3132 | DNA polymerase subunit beta | |||
3133 | 102 aa hypothetical protein | |||
3134 | S | S.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | S.Cdi27638ORF3135P |
3135 | M | M.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | M.Cdi27638ORF3135P |
3136 | tagatose-bisphosphate aldolase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2854 | phospholipase | |||
2855 | M | M.Cdo072ORF14340P (100% identity) | CAAAAA | M.Cdi27638ORF2855P |
2856 | badm/rrf2 family transcriptional regulator | |||
3508 | S-adenosylmethionine synthetase | |||
3509 | M | M.Cdi27640ORF3509P (100% identity) | M.Cdi27638ORF3509P | |
3510 | site-specific DNA methylase | |||
3509 | DNA methylase N-4/N-6 domain-containing protein | |||
3510 | M | M.Cdi27640ORF3510P (100% identity) | M.Cdi27638ORF3510P | |
3511 | virulence-like protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2171 | sigma-54-dependent transcriptional regulator | |||
2172 | R | Cdo072McrCP (100% identity) | Cdi27638McrCP | |
2173 | R | Cdo072McrBP (100% identity) | Cdi27638McrBP | |
2174 | cell division protein FtsZ |