Salmonella enterica subsp. enterica serovar Napoli LC0541/17 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Napoli LC0541/17 RM systems
Ref: Clement,M. et al. unpublished
REBASE ref # 26847
| Sequence length: | GenBank #: | |
| Chromosome: | 4,679,033 bp | CP030838 |
| plasmid pLC0541_17: | 90,558 bp | CP030839 |
REBASE acronym: Sen54117
Org_num: 29784
All begin DPF89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3989 | DNA repair helicase RadD | |||
| 3990 | M | M.SenSN310ORF18495P (99% identity) | M.Sen54117ORF3990P | |
| 3991 | S | S.SenSN310ORF18495P (64% identity) | S1.Sen54117ORF3990P | |
| 3992 | 92 aa hypothetical protein | |||
| 3993 | 270 aa hypothetical protein | |||
| ??? | S | S.SenSN310ORF22405P (98% identity) | S2.Sen54117ORF3990P | |
| ??? | S | S.SenSN310ORF22405P (100% identity) | S3.Sen54117ORF3990P | |
| 3995 | 406 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 381 | Cell division protein DamX | |||
| 382 | M | M.StyTDamP (100% identity) | GATC | M.Sen54117DamP |
| 383 | Ribulose-phosphate 3-epimerase | |||
| 481 | 54 aa hypothetical protein | |||
| 482 | M | M.SenSN310ORF16775P (100% identity) | ATGCAT | M.Sen54117ORF482P |
| 483 | DNA-binding protein Fis | |||
| 1109 | 38 aa hypothetical protein | |||
| 1110 | R | SenB82ORF5360P (100% identity) | Sen54117ORF1110P | |
| 1111 | DNA primase TraC | |||
| 1165 | 98 aa hypothetical protein | |||
| 1166 | M | M.EcoE36ORF1839P (100% identity) | M.Sen54117ORF1166P | |
| 1167 | 802 aa hypothetical protein | |||
| 2736 | inner membrane transporter YedA | |||
| 2737 | V | V.StyUK1DcmP (100% identity) | V.Sen54117DcmP | |
| 2738 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen54117DcmP |
| 2739 | protein YedJ | |||
| 3183 | 79 aa hypothetical protein | |||
| 3184 | M | M1.SenSN310ORF7910P (100% identity) | M.Sen54117ORF3184P | |
| 3185 | 167 aa hypothetical protein | |||
| 3185 | 167 aa hypothetical protein | |||
| 3186 | M | M2.SenSN310ORF7910P (100% identity) | M.Sen54117ORF3186P | |
| 3187 | 834 aa hypothetical protein | |||
| plasmid pLC0541_17 | ||||
| 4678 | 308 aa hypothetical protein | |||
| 4679 | M | M.SflC32ORFDP (99% identity) | M.Sen54117ORF4679P | |
| 4680 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3589 | 33 aa hypothetical protein | |||
| 3590 | R | SenHL21ORF17565P (99% identity) | CAGAG | Sen54117ORF3591P |
| 3591 | M | M.Sens29945ORF5080P (100% identity) | CAGAG | M.Sen54117ORF3591P |
| 3592 | metabolite transport protein YjhB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3986 | 95 aa hypothetical protein | |||
| ??? | R | SenSN310MrrP (100% identity) | Sen54117MrrP | |
| 3989 | DNA repair helicase RadD | |||