Ref: Shi,Y. et al. J Environ Sci (China) (2018) In press

REBASE ref # 26767

Sequence length:GenBank #:
Chromosome: 4,650,143 bp CP025706
plasmid pAeca1-b: 221,458 bp CP039627

REBASE acronym: Aca2539

Org_num: 29425

 

All begin C1C91_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
5 ISL3 family transposase
10 R AmeR5022ORF21625P (99% identity) GACNNNNNNCGT Aca2539ORF20P
15 S S.AmeR5022ORF21625P (99% identity) GACNNNNNNCGT S.Aca2539ORF20P
20 M M.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT M.Aca2539ORF20P
25 YchE family NAAT transporter
 
45 two-component system response regulator BtsR
50 M M.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT M.Aca2539ORF50P
55 S S.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT S.Aca2539ORF50P
60 R AmeR5022ORF21625P (100% identity) GACNNNNNNCGT Aca2539ORF50P
65 ISL3 family transposase
 
3665 alpha/beta hydrolase
3670 M M.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT M.Aca2539ORF3670P
3675 S S.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT S.Aca2539ORF3670P
3680 R AmeR5022ORF21625P (100% identity) GACNNNNNNCGT Aca2539ORF3670P
3685 ISL3 family transposase
 
8500 helix-turn-helix transcriptional regulator
8505 R AcaR252IIP (100% identity) CACNNNNNNCTTT Aca2539IP
8510 ATP-binding protein
8515 M M.AcaR252II (100% identity) CACNNNNNNCTTT M.Aca2539I
8520 S S.AcaR252II (100% identity) CACNNNNNNCTTT S.Aca2539I
8525 SIR2 family protein
 
16915 ISL3 family transposase
16920 R AmeR5022ORF21625P (100% identity) GACNNNNNNCGT Aca2539ORF16930P
16925 S S.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT S.Aca2539ORF16930P
16930 M M.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT M.Aca2539ORF16930P
16935 glycine cleavage system aminomethyltransferase
 
17760 ISL3 family transposase
17765 R AmeR5022ORF21625P (100% identity) GACNNNNNNCGT Aca2539ORF17775P
17770 S S.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT S.Aca2539ORF17775P
17775 M M.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT M.Aca2539ORF17775P
17780 J domain-containing protein
 
19880 IS21-like element ISAs27 family transposase
19885 R AcaR252IP (100% identity) CAGNNNNNNCTAY Aca2539IIP
22190 189 aa hypothetical protein
22195 96 aa hypothetical protein
19890 IS630 family transposase
19895 PD-(D/E)XK nuclease family protein
19900 S S.AcaR252I (100% identity) CAGNNNNNNCTAY S.Aca2539II
19905 M M.AcaR252I (100% identity) CAGNNNNNNCTAY M.Aca2539II
19910 toprim domain-containing protein
 
21750 6-carboxytetrahydropterin synthase
21755 M M.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT M.Aca2539ORF21755P
21760 S S.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT S.Aca2539ORF21755P
21765 R AmeR5022ORF21625P (100% identity) GACNNNNNNCGT Aca2539ORF21755P
21770 ISL3 family transposase
 
plasmid pAeca1-b
 
22350 ISL3 family transposase
22355 R AmeR5022ORF21625P (100% identity) GACNNNNNNCGT Aca2539ORF22365P
22360 S S.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT S.Aca2539ORF22365P
22365 M M.AmeR5022ORF21625P (100% identity) GACNNNNNNCGT M.Aca2539ORF22365P
22370 fluoroquinolone-acetylating aminoglycoside
 
22705 183 aa hypothetical protein
22710 M M.SmaY426ORF10P (100% identity) CACNNNNNNNTCGC M.Aca2539III
22715 DUF1016 domain-containing protein
22720 S S.Ecl93bORF4657P (67% identity) CACNNNNNNNTCGC S.Aca2539III
22725 R AmeR5022ORF23120P (100% identity) CACNNNNNNNTCGC Aca2539IIIP
22730 ISL3-like element ISSm4 family transposase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
2640 ribulose-phosphate 3-epimerase
2645 M M.Asp1406DamP (100% identity) GATC M.Aca2539Dam
2650 SPOR domain-containing protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
865 155 aa hypothetical protein
870 R AcaR256ORF20260P (36% identity) Aca2539ORF870P
875 histidine phosphatase family protein
 
17835 class I SAM-dependent methyltransferase
17840 R AcaR252ORF8165P (100% identity) Aca2539ORF17840P
17845 J domain-containing protein