Aeromonas caviae R25-6 |
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Putative Aeromonas caviae R25-6 RM systems
Ref: Shi,Y. et al. J Environ Sci (China) (2018) In press
REBASE ref # 26767
Complete sequence: 4,702,913 bp
GenBank #: CP025705
REBASE acronym: AcaR256
Org_num: 29426
All begin C1C92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6290 | 107 aa hypothetical protein | |||
| 6295 | R | Ave71506ORF21115P (100% identity) | AcaR256ORF6300P | |
| 6300 | M | M.Ave71506ORF21115P (100% identity) | M.AcaR256ORF6300P | |
| 6305 | S | S.Ave71506ORF21115P (18% identity) | S1.AcaR256ORF6300P | |
| 6310 | DUF1153 domain-containing protein | |||
| 6315 | transposase | |||
| 6320 | S | type I restriction endonuclease subunit S | S2.AcaR256ORF6300P | |
| 6325 | IS630-like element ISAhy2 family transposase | |||
| ??? | S | restriction endonuclease | S3.AcaR256ORF6300P | |
| 6330 | DUF3800 domain-containing protein | |||
| 8740 | 365 aa hypothetical protein | |||
| 8745 | M | M.AcaVA2ORF4600P (100% identity) | GGACNNNNCTT | M.AcaR256II |
| 8750 | S | S.AcaVA2ORF4600P (100% identity) | GGACNNNNCTT | S.AcaR256II |
| 8755 | AAA family ATPase | |||
| 8760 | McrC family protein | |||
| 8765 | R | AcaVA2ORF4600P (100% identity) | GGACNNNNCTT | AcaR256IIP |
| 8770 | 180 aa hypothetical protein | |||
| 18875 | M48 family peptidase | |||
| 18880 | R | AcaK433ORF13050P (100% identity) | AcaR256ORF18880P | |
| 18885 | DNA helicase UvrD | |||
| 18895 | 483 aa hypothetical protein | |||
| 18900 | S | S.AcaK433ORF13050P (100% identity) | ACAGNNNNNCTA | S.AcaR256I |
| 18905 | M | M.AcaK433ORF13050P (100% identity) | ACAGNNNNNCTA | M.AcaR256I |
| 18910 | 129 aa hypothetical protein | |||
| 21740 | metal-dependent hydrolase | |||
| 21745 | R | Ave6454ORF14940P (99% identity) | CGAYNNNNNNTCC | AcaR256IIIP |
| 21750 | 230 aa hypothetical protein | |||
| 21755 | chromosome segregation protein SMC | |||
| 21760 | ATP-dependent helicase | |||
| 21765 | DUF2813 domain-containing protein | |||
| 21770 | S | S.AcaK524ORF16545P (98% identity) | CGAYNNNNNNTCC | S.AcaR256III |
| 21775 | M | M.Ave6454ORF14940P (99% identity) | CGAYNNNNNNTCC | M.AcaR256III |
| 21780 | 148 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 630 | ribulose-phosphate 3-epimerase | |||
| 635 | M | M.AspWP2DamP (100% identity) | M.AcaR256DamP | |
| 640 | cell division protein DamX | |||
| 10765 | 145 aa hypothetical protein | |||
| 10770 | M | M.Aca10029ORF4345P (100% identity) | M.AcaR256ORF10770P | |
| 10775 | phage N-6-adenine-methyltransferase | |||
| 10770 | multidrug DMT transporter | |||
| 10775 | M | M.Aca10029ORF4350P (99% identity) | M.AcaR256ORF10775P | |
| 10780 | 67 aa hypothetical protein | |||
| 10820 | 86 aa hypothetical protein | |||
| 10825 | M | M.Aca10029ORF4395P (100% identity) | M.AcaR256ORF10825P | |
| 10830 | 75 aa hypothetical protein | |||
| 21380 | 405 aa hypothetical protein | |||
| 21385 | M | M.AveNIH1ORF20160P (100% identity) | M.AcaR256ORF21385P | |
| 21390 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8750 | restriction endonuclease subunit S | |||
| 8755 | R | Asp1418McrBP (100% identity) | AcaR256McrBP | |
| 8760 | R | Asp1418McrCP (100% identity) | AcaR256McrCP | |
| 8765 | type I restriction endonuclease subunit R | |||
| 20255 | 155 aa hypothetical protein | |||
| 20260 | R | AcaK433ORF14425P (100% identity) | AcaR256ORF20260P | |
| 20265 | histidine phosphatase family protein | |||
| 21730 | DUF1153 domain-containing protein | |||
| 21735 | R | AveWP3MrrP (100% identity) | AcaR256MrrP | |
| 21740 | metal-dependent hydrolase | |||