Escherichia coli C |
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Putative Escherichia coli C RM systems
Ref: Pekar,J.E. et al. unpublished
REBASE ref # 26815
Complete sequence: 4,614,212 bp
GenBank #: CP029371
REBASE acronym: EcoC
Org_num: 3823
All begin DIZ83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11445 | restriction endonuclease | |||
| 11450 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoCORF11455P |
| 11455 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoCORF11455P |
| 11460 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.EcoCORF11455P |
| 11465 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6470 | replication endonuclease | |||
| 6475 | M | M.EcosBORF4330P (100% identity) | GATC | M.EcoCORF6475P |
| 6480 | TraR/DksA family transcriptional regulator | |||
| 16810 | protein DamX | |||
| 16815 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCDamP |
| 16820 | ribulose-phosphate 3-epimerase | |||
| 17485 | DUF2556 domain-containing protein | |||
| 17490 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoCORF17490P |
| 17495 | Fis family transcriptional regulator | |||
| 23615 | helix-turn-helix domain-containing protein | |||
| 23620 | R | Ssp28760ORF14350P (100% identity) | RCSRC | EcoCORF23620P |
| 23625 | transcription factor | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11440 | GTPase | |||
| 11445 | R | Ssp28760MrrP (100% identity) | EcoCMrrP | |
| 11450 | type I restriction-modification system | |||
| 11465 | endoribonuclease SymE | |||
| 11470 | R | Ssp28760McrBP (100% identity) | EcoCMcrBP | |
| 11475 | R | Ssp28760McrCP (100% identity) | EcoCMcrCP | |
| 11480 | DUF1998 domain-containing protein | |||