Salmonella enterica subsp. enterica serovar Heidelberg NCTC5717 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg NCTC5717 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 4,786,558 bp
GenBank #: LS483494
REBASE acronym: Sen5717
Org_num: 29614
All begin NCTC5717_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4465 | restriction endonuclease | |||
| 4466 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen5717IP |
| 4467 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen5717I |
| 4468 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen5717I |
| 4470 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 408 | DamX protein | |||
| ??? | M | M.SenC1810DamP (99% identity) | GATC | M.Sen5717Dam |
| 411 | ribulose-phosphate 3-epimerase | |||
| 516 | protein yhdU | |||
| ??? | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5717III |
| 519 | Fis DNA-binding protein | |||
| 1310 | Predicted ATP-binding protein involved in | |||
| 1311 | M | M.Eco10855ORF5022P (99% identity) | M.Sen5717ORF1311P | |
| 1312 | Uncharacterised protein | |||
| 2054 | metal-dependent phospho hydrolase | |||
| 2055 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen5717DcmP |
| 2056 | V | V.StyTDcmP (100% identity) | V.Sen5717DcmP | |
| 2057 | inner membrane transporter yedA | |||
| 2182 | Uncharacterised protein | |||
| ??? | M | M.SenS712ORF19130P (86% identity) | M.Sen5717ORF2183P | |
| 2185 | Protein of uncharacterised function (DUF1187) | |||
| 2185 | Protein of uncharacterised function (DUF1187) | |||
| 2186 | M | M.Sen633ORF1691P (100% identity) | M.Sen5717ORF2186P | |
| 2187 | Uncharacterised protein | |||
| 4506 | Helicase Type III restriction | |||
| ??? | RM | Sens12373ORF19575P (100% identity) | Sen5717ORF4507P | |
| 4510 | ATP-dependent helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3942 | cytoplasmic protein | |||
| ??? | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen5717IIP |
| 3945 | M | M.Sen30ORF3610P (99% identity) | CAGAG | M.Sen5717II |
| 3946 | type III restriction-modification system StyLTI | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4464 | membrane protein | |||
| 4465 | R | StyUK1MrrP (100% identity) | Sen5717MrrP | |
| 4466 | type I restriction enzyme EcoKI subunit R | |||