Salmonella enterica subsp. salamae NCTC9930 |
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Putative Salmonella enterica subsp. salamae NCTC9930 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 5,118,272 bp
GenBank #: LS483456
REBASE acronym: Sen9930
Org_num: 29591
All begin NCTC9930_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4293 | restriction endonuclease | |||
| 4294 | R | SenC9854IIIP (99% identity) | Sen9930ORF4295P | |
| 4295 | M | M.SenW714ORF20250P (99% identity) | M.Sen9930ORF4295P | |
| 4296 | S | type I restriction-modification system | S1.Sen9930ORF4295P | |
| ??? | S | S.Sen24771ORF4170P (59% identity) | S2.Sen9930ORF4295P | |
| 4299 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 373 | DamX protein | |||
| 374 | M | M.SenSe29DamP (100% identity) | GATC | M.Sen9930DamP |
| 375 | ribulose-phosphate 3-epimerase | |||
| 479 | protein yhdU | |||
| 480 | M | M.SenSe29ORF2290P (100% identity) | ATGCAT | M.Sen9930II |
| 481 | Fis DNA-binding protein | |||
| 678 | gp91 | |||
| 679 | M | M.SenS2085ORF19550P (99% identity) | M.Sen9930ORF679P | |
| 680 | Phage replication protein | |||
| 1620 | Uncharacterised protein | |||
| 1621 | M | M.Sen49284ORF16485P (98% identity) | M.Sen9930ORF1621P | |
| 1622 | phage protein | |||
| 2101 | metal-dependent phospho hydrolase | |||
| 2102 | M | M.Sen9606DcmP (99% identity) | CCWGG | M.Sen9930DcmP |
| 2103 | V | V.SenSe29DcmP (100% identity) | V.Sen9930DcmP | |
| 2104 | inner membrane transporter yedA | |||
| 3125 | Uncharacterised protein | |||
| ??? | M | M.Sen30878ORF4925P (99% identity) | M.Sen9930ORF3126P | |
| 3128 | Uncharacterised protein | |||
| 3860 | Uncharacterised protein | |||
| 3861 | M | M.Sen1091ORF17800P (95% identity) | M.Sen9930ORF3861P | |
| 3862 | phage related protein | |||
| 4327 | DNA repair ATPase | |||
| 4328 | RM | Sen236CAORF17015P (74% identity) | Sen9930ORF4328P | |
| 4329 | spermidine/putrescine ABC transporter ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3780 | cytoplasmic protein | |||
| 3781 | R | Sen435414ORF15405P (99% identity) | CAGAG | Sen9930IP |
| 3782 | M | M.StyUK1I (99% identity) | CAGAG | M.Sen9930I |
| 3783 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4292 | GTPases (G3E family) | |||
| 4293 | R | SenC9854MrrP (99% identity) | Sen9930MrrP | |
| 4294 | type I restriction enzyme EcoKI subunit R | |||