Salmonella enterica subsp. enterica NCTC9872 |
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Putative Salmonella enterica subsp. enterica NCTC9872 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 4,563,000 bp
GenBank #: LS483455
REBASE acronym: Sen9872
Org_num: 29588
All begin NCTC9872_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3777 | Uncharacterised protein | |||
| 3778 | M | M1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | M.Sen9872I |
| ??? | S | S1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | S.Sen9872I |
| 3780 | Uncharacterized conserved protein | |||
| 3781 | Uncharacterized conserved protein | |||
| 3782 | R | SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | Sen9872IP |
| 3783 | metal-dependent hydrolase | |||
| 3783 | metal-dependent hydrolase | |||
| 3784 | M | M.SenSmo02ORF2495P (100% identity) | M.Sen9872ORF3784P | |
| 3785 | S | S.SenSmo02ORF2495P (100% identity) | S.Sen9872ORF3784P | |
| 3786 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 342 | DamX protein | |||
| 343 | M | M.StyTDamP (100% identity) | GATC | M.Sen9872DamP |
| 344 | ribulose-phosphate 3-epimerase | |||
| 444 | protein yhdU | |||
| 445 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen9872III |
| 446 | Fis DNA-binding protein | |||
| 1728 | metal-dependent phospho hydrolase | |||
| 1729 | M | M.SspsA7DcmP (100% identity) | CCWGG | M.Sen9872DcmP |
| 1730 | V | V.StyUK1DcmP (100% identity) | V.Sen9872DcmP | |
| 1731 | inner membrane transporter yedA | |||
| 3341 | prophage integrase | |||
| 3342 | R | Sen8272IIIP (100% identity) | CTTAAG | Sen9872IVP |
| 3343 | M | M.Sen24562ORF17195P (100% identity) | CTTAAG | M.Sen9872IV |
| 3344 | Uncharacterised protein | |||
| 4196 | Uncharacterised protein | |||
| 4197 | R | Bth9NORF1989P (32% identity) | Sen9872ORF4200P | |
| 4198 | Uncharacterised protein | |||
| 4199 | possible endonuclease | |||
| 4200 | M | M.Sen9868ORF4607P (100% identity) | M.Sen9872ORF4200P | |
| 4201 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3305 | cytoplasmic protein | |||
| 3306 | R | Sen75157ORF18265P (99% identity) | CAGAG | Sen9872IIP |
| 3307 | M | M.SspsA7ORF16840P (100% identity) | CAGAG | M.Sen9872II |
| 3308 | metabolite transport protein | |||