Haemophilus influenzae NCTC12975 |
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Putative Haemophilus influenzae NCTC12975 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 1,850,791 bp
GenBank #: LS483438
REBASE acronym: Hin12975
Org_num: 29598
All begin NCTC12975_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 830 | inner membrane protein | |||
| 831 | R | HinP3EMOORF7185P (100% identity) | GCANNNNNNNTTC | Hin12975IIP |
| 832 | DNA binding protein | |||
| 833 | anticodon nuclease | |||
| 834 | S | S.HinP3EMOORF7185P (100% identity) | GCANNNNNNNTTC | S.Hin12975II |
| 835 | M | M.HinP3EMOORF7185P (100% identity) | GCANNNNNNNTTC | M.Hin12975II |
| 836 | oligopeptidase A | |||
| 949 | Signal Recognition Particle (SRP) component with | |||
| 950 | R | HinII3ORF8910P (100% identity) | ATGNNNNNNCCT | Hin12975IP |
| 951 | S | S.HinP3EMOORF6585P (100% identity) | ATGNNNNNNCCT | S.Hin12975I |
| 952 | transcriptional regulator containing an hth | |||
| 953 | M | M.HinP3EMOORF6585P (100% identity) | ATGNNNNNNCCT | M.Hin12975I |
| 954 | NIF3-like protein | |||
| 1281 | translation initiation factor IF-2 | |||
| 1282 | R | HinP3EMOORF3665P (100% identity) | Hin12975ORF1285P | |
| 1283 | Uncharacterised protein | |||
| 1284 | S | S.HinP3EMOORF3665P (100% identity) | S.Hin12975ORF1285P | |
| ??? | M | M.Hin403ORF7195P (100% identity) | M.Hin12975ORF1285P | |
| 1286 | 30s ribosome binding factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1327 | condesin subunit F | |||
| 1328 | M | M.HinKR271ORF1213P (100% identity) | RGCGCY | M.Hin12975ORF1328P |
| 1329 | R | HinP3EMOORF3885P (100% identity) | RGCGCY | Hin12975ORF1328P |
| 1330 | protein involved in chromosome partitioning | |||
| 1350 | valyl-tRNA synthetase | |||
| 1351 | M | M.HinIII8ORF12360P (100% identity) | AAGCTT | M.Hin12975III |
| 1352 | R | HinIII8ORF12360P (100% identity) | AAGCTT | Hin12975IIIP |
| 1353 | ASCH domain | |||
| 1389 | Uncharacterised protein | |||
| 1390 | M | M.HinP3EMOORF4195P (100% identity) | M.Hin12975ORF1390P | |
| 1391 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | ribonuclease HII, degrades RNA of DNA-RNA | |||
| 1781 | M | M.HinII3ORF16980P (100% identity) | CAKAC | M.Hin12975V |
| 1782 | R | HinII7ORF17560P (100% identity) | CAKAC | Hin12975VP |
| 1783 | alkylhydroperoxidase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 840 | phosphatidylglycerophosphatase B | |||
| 841 | M | M.HinP3EMOORF7155P (100% identity) | GATC | M.Hin12975IV |
| 842 | 3-dehydroquinate synthase | |||