Psychrobacter species YP14 |
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Putative Psychrobacter species YP14 RM systems
Ref: Wei,J. unpublished
REBASE ref # 26795
| Sequence length: | GenBank #: | |
| Chromosome: | 2,817,424 bp | CP029789 |
| plasmid plas2: | 19,711 bp | CP029791 |
| plasmid plas3: | 36,270 bp | CP029792 |
| plasmid plas4: | 8,194 bp | CP029793 |
REBASE acronym: PspYP14
Org_num: 29682
All begin DLE54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5055 | alpha/beta hydrolase | |||
| 5060 | M | M.Psp43BORF2019P (87% identity) | M.PspYP14ORF5060P | |
| 5065 | S | S.Mat11091I (46% identity) | S.PspYP14ORF5060P | |
| 5070 | R | Psp43BORF2019P (85% identity) | PspYP14ORF5060P | |
| ??? | AAA family ATPase | |||
| 5555 | 132 aa hypothetical protein | |||
| 5560 | S | S2.Ave18196ORFCP (45% identity) | S1.PspYP14ORF5580P | |
| 5565 | R | PspPRORF1115P (99% identity) | PspYP14ORF5580P | |
| 5570 | 993 aa hypothetical protein | |||
| 5575 | S | S.VphS1ORFDP (41% identity) | S2.PspYP14ORF5580P | |
| 5580 | M | M.PspFG1ORF7495P (94% identity) | M.PspYP14ORF5580P | |
| 5585 | 157 aa hypothetical protein | |||
| 5975 | hydro-lyase | |||
| 5980 | R | PspPRORF1328P (93% identity) | PspYP14ORF6000P | |
| 5985 | 255 aa hypothetical protein | |||
| 5990 | 125 aa hypothetical protein | |||
| 5995 | S | S.VtuFP17ORF1370P (50% identity) | S.PspYP14ORF6000P | |
| 6000 | M | restriction endonuclease subunit M | M.PspYP14ORF6000P | |
| 6005 | 334 aa hypothetical protein | |||
| plasmid plas2 | ||||
| 11785 | 211 aa hypothetical protein | |||
| 11705 | R | PspYP14ORF11855P (97% identity) | PspYP14ORF11715P | |
| 11710 | S | S.Bpi2904ORF1471P (42% identity) | S.PspYP14ORF11715P | |
| 11715 | M | M.PspFG1ORFAP (95% identity) | M.PspYP14ORF11715P | |
| 11720 | 150 aa hypothetical protein | |||
| plasmid plas3 | ||||
| 11840 | 125 aa hypothetical protein | |||
| 11845 | R | PspFG1ORF17255P (99% identity) | PspYP14ORF11855P | |
| 11850 | S | S.Mmo86ORF17055P (80% identity) | S.PspYP14ORF11855P | |
| 11855 | M | M.PspFG1ORFAP (99% identity) | M.PspYP14ORF11855P | |
| 11860 | 150 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid plas4 | ||||
| 11970 | R | Pph10526IIP (97% identity) | PspYP14ORF11975P | |
| 11975 | M | M.Pph10526II (94% identity) | M.PspYP14ORF11975P | |
| 11980 | 83 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5070 | restriction endonuclease subunit R | |||
| ??? | R | Psp43BMcrB2P (66% identity) | PspYP14McrB2P | |
| 5080 | R | ParR7McrCP (54% identity) | PspYP14McrC2P | |
| 5095 | signal recognition particle-docking protein | |||
| 9635 | 344 aa hypothetical protein | |||
| 9655 | R | PspFG1McrCP (99% identity) | PspYP14McrCP | |
| 9660 | R | PspPRMcrB2P (98% identity) | PspYP14McrBP | |
| 9665 | DUF4442 domain-containing protein | |||