Escherichia coli 2016C-3878 |
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Putative Escherichia coli 2016C-3878 RM systems
Ref: Zhu,W. et al. unpublished
REBASE ref # 26751
| Sequence length: | GenBank #: | |
| Chromosome: | 4,995,456 bp | CP029747 |
| plasmid pMCR1-PA: | 276,880 bp | CP029748 |
REBASE acronym: Eco3878
Org_num: 29398
All begin BEN53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1565 | toll/interleukin-1 receptor domain-containing | |||
| 1570 | M | M1.EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | M1.Eco3878ORF1570P |
| 1575 | M | M2.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | M2.Eco3878ORF1570P |
| 1580 | S | S.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | S.Eco3878ORF1570P |
| 1585 | R | EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | Eco3878ORF1570P |
| 1590 | restriction endonuclease subunit M | |||
| 1585 | DEAD/DEAH box helicase | |||
| 1590 | M | M.Eco544ORF3540P (100% identity) | M.Eco3878ORF1590P | |
| 1595 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 455 | BREX-1 system phosphatase PglZ type A | |||
| 460 | RM | EcoP19598ORF21290P (100% identity) | Eco3878ORF460P | |
| 465 | BREX system P-loop protein BrxC | |||
| 4930 | cell division protein ZapA | |||
| 4935 | M | M.EfeC13ORF14690P (100% identity) | M.Eco3878ORF4935P | |
| 4940 | DUF1317 family protein | |||
| 8425 | phosphohydrolase | |||
| 8430 | M | M.EcoWW2DcmP (100% identity) | CCWGG | M.Eco3878DcmP |
| 8435 | V | V.EcoWW2DcmP (100% identity) | V.Eco3878DcmP | |
| 8440 | drug/metabolite exporter YedA | |||
| 17210 | 71 aa hypothetical protein | |||
| 17215 | M | M.Eco0349ORF5505P (100% identity) | M.Eco3878ORF17215P | |
| 17220 | XRE family transcriptional regulator | |||
| 20090 | Fis family transcriptional regulator | |||
| 20095 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco3878ORF20095P |
| 20100 | DUF2556 domain-containing protein | |||
| 20660 | ribulose-phosphate 3-epimerase | |||
| 20665 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3878DamP |
| 20670 | cell division protein DamX | |||
| plasmid pMCR1-PA | ||||
| 26130 | DUF1173 family protein | |||
| 26135 | M | M.YpsF1ORFCP (100% identity) | M.Eco3878ORF26135P | |
| 26140 | thermonuclease family protein | |||