Escherichia coli AR_0085 |
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Putative Escherichia coli AR_0085 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 23638
Complete sequence: 5,213,052 bp
GenBank #: CP029741
REBASE acronym: Eco0085
Org_num: 29177
All begin AM464_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 360 | M48 family peptidase | |||
| 365 | R | EcoS1632ORFHP (99% identity) | Eco0085ORF360P | |
| 370 | YecA family protein | |||
| 370 | YecA family protein | |||
| 375 | S | S.Eco65TORF11860P (63% identity) | TGGANNNNNNCGT | S.Eco0085II |
| 380 | M | M.SflLIN17ORF9030P (99% identity) | TGGANNNNNNCGT | M.Eco0085II |
| 385 | 388 aa hypothetical protein | |||
| 7755 | 75 aa hypothetical protein | |||
| 7760 | R | EcoLR31ORF17520P (100% identity) | Eco0085ORF7775P | |
| 7765 | 387 aa hypothetical protein | |||
| 7770 | S | S.EcoLR72ORF18740P (99% identity) | S.Eco0085ORF7775P | |
| 7775 | M | M.Eco362ORF22501P (92% identity) | M.Eco0085ORF7775P | |
| 7780 | IS4-like element ISVsa5 family transposase | |||
| 16415 | endoribonuclease SymE | |||
| 16420 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco0085I |
| 16425 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco0085I |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | Eco0085IP |
| 16435 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 720 | EamA family transporter | |||
| ??? | V | V.Sdy49550DcmP (88% identity) | CCWGG | V.Eco0085DcmP |
| 730 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco0085Dcm |
| 735 | phosphohydrolase | |||
| 1010 | holin | |||
| 1015 | M | M.EcoB8S18ORF26510P (100% identity) | M.Eco0085ORF1015P | |
| 1020 | TrmB family transcriptional regulator | |||
| 4310 | PerC family transcriptional regulator | |||
| 4315 | M | M.EcoZ151ORF6750P (99% identity) | GATC | M.Eco0085ORF4315P |
| 4320 | DUF1382 domain-containing protein | |||
| 8940 | Fis family transcriptional regulator | |||
| 8945 | M | M.Eco7807ORF19550P (82% identity) | ATGCAT | M.Eco0085ORF8945P |
| 8950 | DUF2556 domain-containing protein | |||
| 9600 | ribulose-phosphate 3-epimerase | |||
| 9605 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0085DamP |
| 9610 | protein DamX | |||
| 13755 | 67 aa hypothetical protein | |||
| 13760 | M | M.Efe38C01ORF1055P (100% identity) | M.Eco0085ORF13760P | |
| 13765 | lysis protein S | |||
| 19865 | recombination protein NinB | |||
| 19870 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco0085ORF19870P |
| 19875 | NinE family protein | |||
| 21990 | 71 aa hypothetical protein | |||
| 21995 | M | M.EcoPEC0006ORF1235P (100% identity) | M.Eco0085ORF21995P | |
| 22000 | transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16400 | 0 aa hypothetical protein | |||
| 16405 | R | SenHNK130McrCP (100% identity) | Eco0085McrCP | |
| 16410 | R | SenHNK130McrBP (99% identity) | Eco0085McrBP | |
| 16415 | endoribonuclease SymE | |||
| ??? | type I restriction-modification system endonuclease | |||
| 16435 | R | SenHNK130MrrP (99% identity) | Eco0085MrrP | |
| 16440 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21720 | TraR/DksA family transcriptional regulator | |||
| 21725 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco0085ORF21725P |
| 21730 | endonuclease | |||