Clostridium perfringens EHE-NE18 |
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Putative Clostridium perfringens EHE-NE18 RM systems
Ref: Lacey,J.A. et al. BMC Genomics 19 (1), 379 (2018)
REBASE ref # 26738
| Sequence length: | GenBank #: | |
| Chromosome: | 3,463,721 bp | CP025501 |
| plasmid pJIR3535: | 81,826 bp | CP025502 |
| plasmid pJIR3537: | 48,779 bp | CP025504 |
| plasmid pJIR3844: | 69,606 bp | CP025503 |
REBASE acronym: CpeENE18
Org_num: 29368
All begin CYK96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 530 | 320 aa hypothetical protein | |||
| 535 | R | Cpe030ORF12605P (98% identity) | CpeENE18ORF555P | |
| 540 | 96 aa hypothetical protein | |||
| 545 | 155 aa hypothetical protein | |||
| 550 | S | S.PmeBin587ORFBP (37% identity) | S.CpeENE18ORF555P | |
| 555 | M | M.Cpe030ORF12605P (95% identity) | M.CpeENE18ORF555P | |
| 560 | ATP-dependent helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2345 | peptide-methionine (S)-S-oxide reductase | |||
| 2350 | M | M.CpeQHY2ORF14995P (100% identity) | GTATAC | M.CpeENE18ORF2350P |
| 2355 | YhgE/Pip domain-containing protein | |||
| 4900 | 0 aa hypothetical protein | |||
| 4905 | M | M.CpeNE18ORF1915P (100% identity) | M.CpeENE18ORF4905P | |
| 4910 | 82 aa hypothetical protein | |||
| 5065 | 61 aa hypothetical protein | |||
| 5070 | M | M.CpeNE18ORF2080P (100% identity) | M.CpeENE18ORF5070P | |
| 5075 | endolysin | |||
| 6865 | 373 aa hypothetical protein | |||
| 6870 | M | M.CpeNE18ORF3915P (97% identity) | M.CpeENE18ORF6870P | |
| 6875 | chromosome partitioning protein ParB | |||
| 8255 | DUF1998 domain-containing protein | |||
| 8260 | M | M.CpeS1ORF18840P (100% identity) | M.CpeENE18ORF8260P | |
| 8265 | ImmA/IrrE family metallo-endopeptidase | |||
| 11315 | 357 aa hypothetical protein | |||
| 11320 | M | M.CpeNE18ORF8340P (100% identity) | M.CpeENE18ORF11320P | |
| 11325 | Zn peptidase | |||
| 15745 | chromosome partitioning protein ParB | |||
| ??? | S | S.CpeNE18ORF12755P (100% identity) | S.CpeENE18ORF15755P | |
| 15755 | RM | CpeNE18ORF12755P (100% identity) | CpeENE18ORF15755P | |
| 15760 | 67 aa hypothetical protein | |||
| plasmid pJIR3535 | ||||
| 15950 | 94 aa hypothetical protein | |||
| 15955 | M | M.CpeNE18ORF19P (100% identity) | M.CpeENE18ORF15955P | |
| 15960 | DUF4236 domain-containing protein | |||
| 16240 | 340 aa hypothetical protein | |||
| 16245 | M | M.CpeENE18ORF16650P (100% identity) | M.CpeENE18ORF16245P | |
| 16250 | 101 aa hypothetical protein | |||
| plasmid pJIR3537 | ||||
| 16805 | DUF4417 domain-containing protein | |||
| 16810 | M | M.CpeS10ORF15250P (100% identity) | M.CpeENE18ORF16810P | |
| 16815 | 101 aa hypothetical protein | |||
| 16885 | 94 aa hypothetical protein | |||
| 16890 | M | M.CpeNE18ORF19P (100% identity) | M.CpeENE18ORF16890P | |
| 16895 | DUF4236 domain-containing protein | |||
| plasmid pJIR3844 | ||||
| 16350 | 94 aa hypothetical protein | |||
| 16355 | M | M.CpeNE18ORF19P (100% identity) | M.CpeENE18ORF16355P | |
| 16360 | DUF4236 domain-containing protein | |||
| 16645 | 340 aa hypothetical protein | |||
| 16650 | M | M.CpeENE18ORF16245P (100% identity) | M.CpeENE18ORF16650P | |
| 16655 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8115 | 103 aa hypothetical protein | |||
| 8120 | R | CpeNE18McrBP (100% identity) | CpeENE18McrBP | |
| 8125 | R | CpeNE18McrCP (100% identity) | CpeENE18McrCP | |
| 8130 | 127 aa hypothetical protein | |||