Salmonella enterica DA34833 |
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Putative Salmonella enterica DA34833 RM systems
Ref: Nicoloff,H. et al. unpublished
REBASE ref # 26701
| Sequence length: | GenBank #: | |
| Chromosome: | 4,933,522 bp | CP029595 |
| plasmid pDA34833-94: | 94,001 bp | CP029596 |
REBASE acronym: Sen34833
Org_num: 29280
All begin DLJ70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3390 | endoribonuclease SymE | |||
| 3395 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen34833ORF3400P |
| 3400 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen34833ORF3400P |
| 3405 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen34833ORF3400P |
| 3410 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3220 | 363 aa hypothetical protein | |||
| 3225 | RM | StyUK1IV (100% identity) | GATCAG | Sen34833ORF3225P |
| 3230 | BREX system P-loop protein BrxC | |||
| 14945 | drug/metabolite exporter YedA | |||
| 14950 | V | V.StyUK1DcmP (100% identity) | V.Sen34833DcmP | |
| 14955 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen34833DcmP |
| 14960 | phosphohydrolase | |||
| 15205 | RusA family crossover junction | |||
| 15210 | M | M.StyUK1V (100% identity) | GATC | M.Sen34833ORF15210P |
| 15215 | PerC family transcriptional regulator | |||
| 18750 | RusA family crossover junction | |||
| 18755 | M | M.Sty13348ORF110P (100% identity) | M.Sen34833ORF18755P | |
| 18760 | PerC family transcriptional regulator | |||
| 22640 | Fis family transcriptional regulator | |||
| 22645 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen34833ORF22645P |
| 22650 | DUF2556 domain-containing protein | |||
| 23155 | ribulose-phosphate 3-epimerase | |||
| 23160 | M | M.StyTDamP (100% identity) | GATC | M.Sen34833DamP |
| 23165 | SPOR domain-containing protein | |||
| plasmid pDA34833-94 | ||||
| 25865 | 73 aa hypothetical protein | |||
| 25870 | M | M.StyUK1ORFAP (100% identity) | M.Sen34833ORF25870P | |
| 25875 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6005 | MFS transporter | |||
| 6010 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen34833ORF6010P |
| 6015 | R | StyUK1IP (99% identity) | CAGAG | Sen34833ORF6010P |
| 6020 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3405 | type I restriction-modification system | |||
| 3410 | R | StyUK1MrrP (100% identity) | Sen34833MrrP | |
| 3415 | 95 aa hypothetical protein | |||