Salmonella enterica DA34827 |
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Putative Salmonella enterica DA34827 RM systems
Ref: Nicoloff,H. et al. unpublished
REBASE ref # 26701
| Sequence length: | GenBank #: | |
| Chromosome: | 4,933,577 bp | CP029593 |
| plasmid pDA34827-94: | 94,034 bp | CP029594 |
REBASE acronym: Sen34827
Org_num: 29279
All begin DLJ69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11950 | endoribonuclease SymE | |||
| 11955 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen34827ORF11960P |
| 11960 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen34827ORF11960P |
| 11965 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen34827ORF11960P |
| 11970 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | RusA family crossover junction | |||
| 1805 | M | M.Sty13348ORF110P (100% identity) | M.Sen34827ORF1805P | |
| 1810 | PerC family transcriptional regulator | |||
| 5690 | Fis family transcriptional regulator | |||
| 5695 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen34827ORF5695P |
| 5700 | DUF2556 domain-containing protein | |||
| 6200 | ribulose-phosphate 3-epimerase | |||
| 6205 | M | M.StyTDamP (100% identity) | GATC | M.Sen34827DamP |
| 6210 | SPOR domain-containing protein | |||
| 11780 | 363 aa hypothetical protein | |||
| 11785 | RM | StyUK1IV (100% identity) | GATCAG | Sen34827ORF11785P |
| 11790 | BREX system P-loop protein BrxC | |||
| 23505 | drug/metabolite exporter YedA | |||
| 23510 | V | V.StyUK1DcmP (100% identity) | V.Sen34827DcmP | |
| 23515 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen34827DcmP |
| 23520 | phosphohydrolase | |||
| 23765 | RusA family crossover junction | |||
| 23770 | M | M.StyUK1V (100% identity) | GATC | M.Sen34827ORF23770P |
| 23775 | PerC family transcriptional regulator | |||
| plasmid pDA34827-94 | ||||
| 25710 | 73 aa hypothetical protein | |||
| 25715 | M | M.StyUK1ORFAP (100% identity) | M.Sen34827ORF25715P | |
| 25720 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14555 | MFS transporter | |||
| 14560 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen34827ORF14560P |
| 14565 | R | StyUK1IP (99% identity) | CAGAG | Sen34827ORF14560P |
| 14570 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11965 | type I restriction-modification system | |||
| 11970 | R | StyUK1MrrP (100% identity) | Sen34827MrrP | |
| 11975 | 95 aa hypothetical protein | |||